Parental gene:

EIF2S2, ENSG00000125977

Aliases:EIF2S2, EIF2, EIF2B, EIF2beta, PPP1R67, eIF-2-beta
Description:eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa [Source:HGNC Symbol;Acc:3266]
Organism:Human (Homo sapiens)
Coordinates:20:32676103..32700138(-)


>ENSG00000125977
ATGTCTGGGGACGAGATGATTTTTGATCCTACTATGAGCAAGAAGAAAAAGAAGAAGAAGAAGCCTTTTATGTTAGATGA
GGAAGGGGATACCCAAACAGAGGAAACCCAGCCTTCAGAAACAAAAGAAGTGGAGCCAGAGCCAACTGAGGACAAGGATT
TGGAAGCTGATGAAGAGGACACTAGGAAAAAAGATGCTTCTGATGATCTAGATGACTTGAACTTCTTTAATCAAAAGAAA
AAGAAGAAAAAAACTAAAAAGATATTTGATATTGATGAAGCTGAAGAAGGTGTAAAGGATCTTAAGATTGAAAGTGATGT
TCAAGAACCAACTGAACCAGAGGATGACCTTGACATTATGCTTGGCAATAAAAAGAAGAAAAAGAAGAATGTTAAGTTCC
CAGATGAGGATGAAATACTAGAGAAAGATGAAGCTCTAGAAGATGAAGACAACAAAAAAGATGATGGTATCTCATTCAGT
AATCAGACAGGCCCTGCTTGGGCAGGCTCAGAAAGAGACTACACATACGAGGAGCTGCTGAATCGAGTGTTCAACATCAT
GAGGGAAAAGAATCCAGATATGGTTGCTGGGGAGAAAAGGAAATTTGTCATGAAACCTCCACAAGTCGTCCGAGTAGGAA
CCAAGAAAACTTCTTTTGTCAACTTTACAGATATCTGTAAACTATTACATCGTCAGCCCAAACATCTCCTTGCATTTTTG
TTGGCTGAATTGGGTACAAGTGGTTCTATAGATGGTAATAACCAACTTGTAATCAAAGGAAGATTCCAACAGAAACAGAT
AGAAAATGTCTTGAGAAGATATATCAAGGAATATGTCACTTGTCACACATGCCGATCACCGGACACAATCCTGCAGAAGG
ACACACGACTCTATTTCCTACAGTGCGAAACTTGTCATTCTAGATGTTCTGTTGCCAGTATCAAAACCGGCTTCCAGGCT
GTCACGGGCAAGCGAGCACAGCTCCGTGCCAAAGCTAACTAA

Library Parental gene expression (RPM)
bodymap2_liver 56 .61 RPM
bodymap2_lung 109 .70 RPM
bodymap2_breast 65 .00 RPM
bodymap2_adipose 85 .12 RPM
bodymap2_adrenal 97 .50 RPM
bodymap2_skeletal_muscle 121 .91 RPM
bodymap2_thyroid 105 .98 RPM
bodymap2_prostate 77 .73 RPM
bodymap2_colon 100 .30 RPM
bodymap2_testis 91 .55 RPM
bodymap2_brain 64 .25 RPM
bodymap2_heart 46 .08 RPM
bodymap2_white_blood_cells 71 .96 RPM
bodymap2_lymph_node 73 .37 RPM
bodymap2_ovary 114 .99 RPM
bodymap2_kidney 69 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000018334 ortholog_one2many 2 retrogenes
retro_cjac_4196, retro_cjac_697,
Cavia porcellus ENSCPOG00000015439 possible_ortholog 1 retrogene
retro_cpor_1143,
Echinops telfairi ENSETEG00000001922 possible_ortholog 1 retrogene
retro_etel_1101,
Gorilla gorilla ENSGGOG00000015546 ortholog_one2one 5 retrogenes
retro_ggor_1683, retro_ggor_1726, retro_ggor_2007, retro_ggor_280, retro_ggor_604,
Microcebus murinus ENSMICG00000006944 ortholog_one2one 1 retrogene
retro_mmur_1583,
Macaca mulatta ENSMMUG00000018095 ortholog_one2one 1 retrogene
retro_mmul_1483,
Monodelphis domestica ENSMODG00000002805 ortholog_one2one 5 retrogenes
retro_mdom_1981, retro_mdom_365, retro_mdom_368, retro_mdom_370, retro_mdom_837,
Nomascus leucogenys ENSNLEG00000010034 ortholog_one2one 2 retrogenes
retro_nleu_2242, retro_nleu_466,
Otolemur garnettii ENSOGAG00000001417 ortholog_one2many 1 retrogene
retro_ogar_196,
Pongo abelii ENSPPYG00000010933 ortholog_one2one 2 retrogenes
retro_pabe_1955, retro_pabe_2421,
Pan troglodytes ENSPTRG00000013412 ortholog_one2one 2 retrogenes
retro_ptro_1600, retro_ptro_508,
Rattus norvegicus ENSRNOG00000017447 possible_ortholog 1 retrogene
retro_rnor_2395,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_713 86.49 100.00
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2. retro_hsap_2176 96.89 57.96
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3. retro_hsap_2260 65.78 55.86
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Download FASTA sequences of all ENSG00000125977 retrocopies