Parental gene:

NDUFAF4, ENSG00000123545

Aliases:NDUFAF4, C6orf66, HRPAP20, My013, bA22L21.1
Description:NADH dehydrogenase (ubiquinone) complex I, assembly factor 4 [Source:HGNC Symbol;Acc:21034]
Organism:Human (Homo sapiens)
Coordinates:6:97337188..97345757(-)


>ENSG00000123545
ATGGGAGCACTAGTGATTCGCGGTATCAGGAATTTCAACCTAGAGAACCGAGCGGAACGGGAAATCAGCAAGATGAAGCC
CTCTGTCGCTCCCAGACACCCCTCTACCAACAGCCTCCTGCGAGAGCAGATTAGTCTCTATCCAGAAGTTAAAGGAGAGA
TTGCTCGTAAAGATGAAAAGCTGCTGTCGTTTCTAAAAGATGTGTATGTTGATTCCAAAGATCCTGTGTCTTCCTTGCAG
GTAAAAGCTGCTGAAACATGTCAAGAGCCGAAGGAATTCAGATTGCCGAAAGACCATCATTTTGATATGATAAATATTAA
GAGCATTCCCAAAGGCAAAATTTCCATTGTAGAAGCATTGACACTTCTCAATAATCATAAGCTTTTCCCAGAAACCTGGA
CTGCTGAGAAAATAATGCAGGAATACCAGTTAGAACAGAAAGATGTGAATTCTCTTCTTAAATATTTTGTTACTTTTGAA
GTCGAAATCTTCCCTCCTGAAGACAAGAAAGCAATACGATCAAAATGA

Library Parental gene expression (RPM)
bodymap2_liver 17 .70 RPM
bodymap2_lung 10 .69 RPM
bodymap2_breast 20 .47 RPM
bodymap2_adipose 11 .07 RPM
bodymap2_adrenal 18 .42 RPM
bodymap2_skeletal_muscle 24 .64 RPM
bodymap2_thyroid 42 .39 RPM
bodymap2_prostate 31 .02 RPM
bodymap2_colon 25 .39 RPM
bodymap2_testis 29 .01 RPM
bodymap2_brain 53 .26 RPM
bodymap2_heart 45 .54 RPM
bodymap2_white_blood_cells 8 .51 RPM
bodymap2_lymph_node 26 .02 RPM
bodymap2_ovary 27 .32 RPM
bodymap2_kidney 45 .99 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003174 ortholog_one2one 1 retrogene
retro_btau_1763,
Choloepus hoffmanni ENSCHOG00000005145 ortholog_one2one 2 retrogenes
retro_chof_2271, retro_chof_891,
Callithrix jacchus ENSCJAG00000001235 ortholog_one2many 2 retrogenes
retro_cjac_1613, retro_cjac_1700,
Cavia porcellus ENSCPOG00000007618 ortholog_one2one 1 retrogene
retro_cpor_425,
Gorilla gorilla ENSGGOG00000012070 ortholog_one2one 4 retrogenes
retro_ggor_1147, retro_ggor_1931, retro_ggor_2529, retro_ggor_451,
Microcebus murinus ENSMICG00000015734 ortholog_one2one 1 retrogene
retro_mmur_1624,
Macaca mulatta ENSMMUG00000018843 ortholog_one2one 4 retrogenes
retro_mmul_1717, retro_mmul_2138, retro_mmul_578, retro_mmul_734,
Mus musculus ENSMUSG00000028261 ortholog_one2one 3 retrogenes
retro_mmus_1153, retro_mmus_1290, retro_mmus_3668,
Nomascus leucogenys ENSNLEG00000013568 ortholog_one2one 4 retrogenes
retro_nleu_171, retro_nleu_1716, retro_nleu_678, retro_nleu_890,
Oryctolagus cuniculus ENSOCUG00000002152 ortholog_one2one 1 retrogene
retro_ocun_1162,
Pongo abelii ENSPPYG00000016857 ortholog_one2one 4 retrogenes
retro_pabe_1244, retro_pabe_2241, retro_pabe_257, retro_pabe_3160,
Pan troglodytes ENSPTRG00000018435 ortholog_one2one 4 retrogenes
retro_ptro_1013, retro_ptro_1877, retro_ptro_2552, retro_ptro_358,
Rattus norvegicus ENSRNOG00000007506 ortholog_one2many 3 retrogenes
retro_rnor_1617, retro_rnor_2973, retro_rnor_675,
Tursiops truncatus ENSTTRG00000010911 ortholog_one2one 1 retrogene
retro_ttru_628,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_477 82.12 86.29
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2. retro_hsap_1494 86.34 92.00
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3. retro_hsap_2774 87.43 100.00
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4. retro_hsap_3761 82.35 87.43
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Download FASTA sequences of all ENSG00000123545 retrocopies