Parental gene:

TMEM30A, ENSG00000112697

Aliases:TMEM30A, C6orf67, CDC50A
Description:transmembrane protein 30A [Source:HGNC Symbol;Acc:16667]
Organism:Human (Homo sapiens)
Coordinates:6:75962639..75994684(-)


>ENSG00000112697
ATGGCGATGAACTATAACGCGAAGGATGAAGTGGACGGTGGGCCCCCGTGTGCTCCGGGGGGCACCGCGAAGACTCGGAG
ACCGGATAACACGGCCTTCAAACAGCAACGGCTGCCAGCTTGGCAGCCCATCCTTACGGCTGGCACGGTGCTACCTATTT
TCTTCATCATCGGTCTCATCTTCATTCCCATCGGCATTGGCATTTTTGTCACCTCCAACAACATCCGCGAGATCGAGATT
GATTATACCGGAACAGAGCCTTCCAGTCCCTGTAATAAATGTTTATCTCCGGATGTGACACCTTGCTTTTGTACCATTAA
CTTCACACTGGAAAAGTCATTTGAGGGCAACGTGTTTATGTATTATGGACTGTCTAATTTCTATCAAAACCATCGTCGTT
ACGTGAAATCTCGAGATGATAGTCAACTAAATGGAGATTCTAGTGCTTTGCTTAATCCCAGTAAGGAATGTGAACCTTAT
CGAAGAAATGAAGACAAACCAATTGCTCCTTGTGGAGCTATTGCCAACAGCATGTTTAATGATACATTAGAATTGTTTCT
CATTGGCAATGATTCTTATCCTATACCTATCGCTTTGAAAAAGAAAGGTATTGCTTGGTGGACAGATAAAAATGTGAAAT
TCAGAAATCCCCCTGGAGGAGACAACCTGGAAGAACGATTTAAAGGTACAACAAAGCCTGTGAACTGGCTTAAACCAGTT
TACATGCTGGATTCTGACCCAGATAATAATGGATTCATAAATGAGGATTTTATTGTTTGGATGCGTACTGCAGCATTACC
TACTTTTCGCAAGTTGTATCGTCTTATAGAAAGGAAAAGTGATTTACATCCAACATTACCAGCTGGCCGATACTCTTTGA
ATGTCACATACAATTACCCTGTACATTATTTTGATGGACGAAAACGGATGATCTTGAGCACTATTTCATGGATGGGAGGA
AAAAATCCATTTTTGGGGATTGCTTACATCGCTGTTGGATCCATCTCCTTCCTTCTGGGAGTTGTACTGCTAGTAATTAA
TCATAAATATAGAAACAGTAGTAATACAGCTGACATTACCATTTAA

Library Parental gene expression (RPM)
bodymap2_liver 131 .24 RPM
bodymap2_lung 400 .02 RPM
bodymap2_breast 232 .10 RPM
bodymap2_adipose 263 .12 RPM
bodymap2_adrenal 269 .64 RPM
bodymap2_skeletal_muscle 82 .70 RPM
bodymap2_thyroid 340 .26 RPM
bodymap2_prostate 254 .52 RPM
bodymap2_colon 302 .78 RPM
bodymap2_testis 220 .58 RPM
bodymap2_brain 478 .86 RPM
bodymap2_heart 108 .11 RPM
bodymap2_white_blood_cells 302 .19 RPM
bodymap2_lymph_node 214 .39 RPM
bodymap2_ovary 204 .28 RPM
bodymap2_kidney 286 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005100 ortholog_one2one 1 retrogene
retro_btau_72,
Canis familiaris ENSCAFG00000002708 ortholog_one2one 1 retrogene
retro_cfam_26,
Callithrix jacchus ENSCJAG00000010325 ortholog_one2one 1 retrogene
retro_cjac_801,
Cavia porcellus ENSCPOG00000020712 ortholog_one2many 1 retrogene
retro_cpor_23,
Myotis lucifugus ENSMLUG00000011923 ortholog_one2one 1 retrogene
retro_mluc_1871,
Monodelphis domestica ENSMODG00000018502 ortholog_one2one 1 retrogene
retro_mdom_287,
Mus musculus ENSMUSG00000032328 ortholog_one2one 1 retrogene
retro_mmus_108,
Nomascus leucogenys ENSNLEG00000004962 ortholog_one2one 1 retrogene
retro_nleu_69,
Otolemur garnettii ENSOGAG00000015718 ortholog_one2one 1 retrogene
retro_ogar_22,
Pongo abelii ENSPPYG00000016782 ortholog_one2one 1 retrogene
retro_pabe_204,
Pelodiscus sinensis ENSPSIG00000007174 ortholog_one2one 1 retrogene
retro_psin_61,
Rattus norvegicus ENSRNOG00000010895 ortholog_one2one 1 retrogene
retro_rnor_399,
Ictidomys tridecemlineatus ENSSTOG00000002543 ortholog_one2one 1 retrogene
retro_itri_50,
Tarsius syrichta ENSTSYG00000008211 ortholog_one2one 1 retrogene
retro_tsyr_928,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_12 55.43 70.64
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Download FASTA sequences of all ENSG00000112697 retrocopies