Parental gene: | SCAMP1, ENSG00000085365 |
| Aliases: | SCAMP1, SCAMP, SCAMP37 |
| Description: | secretory carrier membrane protein 1 [Source:HGNC Symbol;Acc:10563] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 5:77656338..77776562(+) |
>ENSG00000085365
ATGTCGGATTTCGACAGTAACCCGTTTGCCGACCCGGATCTCAACAATCCCTTCAAGGATCCATCAGTTACACAAGTGAC
AAGAAATGTTCCACCAGGACTTGATGAATATAATCCATTCTCGGATTCTAGAACACCTCCACCAGGCGGTGTGAAGATGC
CTAATGTACCCAATACACAACCAGCAATAATGAAACCAACAGAGGAACATCCAGCTTATACACAGATTGCAAAGGAACAT
GCATTGGCCCAAGCTGAACTTCTTAAGCGCCAGGAAGAACTAGAAAGAAAAGCCGCAGAATTAGATCGTCGGGAACGAGA
AATGCAAAACCTCAGTCAACATGGTAGAAAAAATAATTGGCCACCTCTTCCTAGCAATTTTCCTGTCGGACCTTGTTTCT
ATCAGGATTTTTCTGTAGACATTCCTGTAGAATTCCAAAAGACAGTAAAGCTTATGTACTACTTGTGGATGTTCCATGCA
GTAACACTGTTTCTAAATATCTTCGGATGCTTGGCTTGGTTTTGTGTTGATTCTGCAAGAGCGGTTGATTTTGGATTGAG
TATCCTGTGGTTCTTGCTTTTTACTCCTTGTTCATTTGTCTGTTGGTACAGACCACTTTATGGAGCTTTCAGGAGTGACA
GTTCATTTAGATTCTTTGTATTCTTCTTCGTCTATATTTGTCAGTTTGCTGTACATGTACTCCAAGCTGCAGGATTTCAT
AACTGGGGCATTGGTGGTTGGATTTCATCCCTTACTGGTCTCAACCAAAATATTCCTGTTGGAATCATGATGATAATCAT
AGCAGCACTTTTCACAGCATCAGCAGTCATCTCACTAGTTATGTTCAAAAAAGTACATGGACTATATCGCACAACAGGTG
CTAGTTTTGAGAAGGCCCAACAGGAGTTTGCAACAGGTGTGATGTCCAACAAAACTGTCCAGACCGCAGCTGCAAATGCA
GCTTCAACTGCAGCATCTAGTGCAGCTCAGAATGCTTTCAAGGGTAACCAGATTTAA
ATGTCGGATTTCGACAGTAACCCGTTTGCCGACCCGGATCTCAACAATCCCTTCAAGGATCCATCAGTTACACAAGTGAC
AAGAAATGTTCCACCAGGACTTGATGAATATAATCCATTCTCGGATTCTAGAACACCTCCACCAGGCGGTGTGAAGATGC
CTAATGTACCCAATACACAACCAGCAATAATGAAACCAACAGAGGAACATCCAGCTTATACACAGATTGCAAAGGAACAT
GCATTGGCCCAAGCTGAACTTCTTAAGCGCCAGGAAGAACTAGAAAGAAAAGCCGCAGAATTAGATCGTCGGGAACGAGA
AATGCAAAACCTCAGTCAACATGGTAGAAAAAATAATTGGCCACCTCTTCCTAGCAATTTTCCTGTCGGACCTTGTTTCT
ATCAGGATTTTTCTGTAGACATTCCTGTAGAATTCCAAAAGACAGTAAAGCTTATGTACTACTTGTGGATGTTCCATGCA
GTAACACTGTTTCTAAATATCTTCGGATGCTTGGCTTGGTTTTGTGTTGATTCTGCAAGAGCGGTTGATTTTGGATTGAG
TATCCTGTGGTTCTTGCTTTTTACTCCTTGTTCATTTGTCTGTTGGTACAGACCACTTTATGGAGCTTTCAGGAGTGACA
GTTCATTTAGATTCTTTGTATTCTTCTTCGTCTATATTTGTCAGTTTGCTGTACATGTACTCCAAGCTGCAGGATTTCAT
AACTGGGGCATTGGTGGTTGGATTTCATCCCTTACTGGTCTCAACCAAAATATTCCTGTTGGAATCATGATGATAATCAT
AGCAGCACTTTTCACAGCATCAGCAGTCATCTCACTAGTTATGTTCAAAAAAGTACATGGACTATATCGCACAACAGGTG
CTAGTTTTGAGAAGGCCCAACAGGAGTTTGCAACAGGTGTGATGTCCAACAAAACTGTCCAGACCGCAGCTGCAAATGCA
GCTTCAACTGCAGCATCTAGTGCAGCTCAGAATGCTTTCAAGGGTAACCAGATTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 18 .17 RPM |
| bodymap2_lung | 66 .70 RPM |
| bodymap2_breast | 63 .87 RPM |
| bodymap2_adipose | 82 .63 RPM |
| bodymap2_adrenal | 39 .77 RPM |
| bodymap2_skeletal_muscle | 36 .05 RPM |
| bodymap2_thyroid | 91 .03 RPM |
| bodymap2_prostate | 103 .40 RPM |
| bodymap2_colon | 111 .08 RPM |
| bodymap2_testis | 74 .38 RPM |
| bodymap2_brain | 211 .64 RPM |
| bodymap2_heart | 46 .78 RPM |
| bodymap2_white_blood_cells | 66 .05 RPM |
| bodymap2_lymph_node | 52 .72 RPM |
| bodymap2_ovary | 74 .93 RPM |
| bodymap2_kidney | 90 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000032395 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000008868 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015191 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000016398 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000019731 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012775 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000014113 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_189 | 82.29 | 56.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000085365 retrocopies