Parental gene:

SCAMP1, ENSCPOG00000008868

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_83:1534914..1698210(+)


>ENSCPOG00000008868
ATGTCGGATTTTGACAGTAACCCGTTTGCGGACCCGGATCTCAATAACCCGTTCAAGGATCCATCAGTTACACAGGTGAC
AAGAAATGTTCCACCAGGACTTGATGAATATAATCCATTCTCAGATTCTAGAACACCTCCACCAGGCAGTGTGAAAATGC
CTAATGTACCTAATACACAGCCAGCAATAATGAAACCAACAGAGGAACATCCAGCTTATACACAGATTGCAAAGGAACAT
GCCCTCGCTCAAGCTGAACTTCTTAAGCGGCAAGAAGAACTAGAAAGAAAAGCTGCAGAATTAGATCGTCGAGAACGAGA
AATGCAAAACCTCAGTCAACATGGTAGAAAAAATAATTGGCCACCTCTTCCTGAGAATTTTCCTGTGGGACCTTGTTTCT
ATCAGGACTTTTCTGTAGACATTCCCGTAGAGTTCCAGAAGACAGTAAAGCTCATGTACTACTTGTGGATGTTCCACGCT
GTAACACTGTTTCTGAATATCTTTGGATGTCTGGCTTGGTTTTTTGTGGACTCCTCCAGAGGGGTTGATTTTGGACTGAG
CATCCTGTGGTTTGTGCTGTTCACACCTTGCTCATTTGTCTGCTGGTATAGACCACTTTACGGAGCCTTCAGGAGCGACA
GTTCCTTCAGATTCTTTGTGTTCTTCTTCGTCTATATCTGTCAGTTTGCTGTCCATGTGCTCCAGGCTGCTGGGTTTCAT
AACTGGGGCAATTGTGGCTGGATTTCATCCCTTACTGGCCTTAACCAAAATATTCCTGTTGGAATCATGATGATAATCAT
AGCAGCACTTTTCACAGCATCAGCAGTCATCTCACTAGTTATGTTTAAAAAAGTACATGGACTGTATCGTACAACGGGTG
CTAGTTTTGAGAAGGCCCAACAGGAGTTTGCGACAGGTGTGATGTCCAACAAGACTGTCCAGACTGCAGCTGCAAATGCA
GCTTCCACAGCGGCAACGAGTGCAGCAACAAGTGCCTTCAAGGGTAACCAGCTC

Library Parental gene expression (RPM)
SRP017611_liver 8 .14 RPM
SRP017611_kidney 10 .05 RPM
SRP017611_brain 48 .03 RPM
SRP040447_lung 9 .89 RPM
SRP040447_skeletal_muscle 10 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000032395 ortholog_one2one 1 retrogene
retro_cfam_227,
Homo sapiens ENSG00000085365 ortholog_one2one 1 retrogene
retro_hsap_189,
Gorilla gorilla ENSGGOG00000015191 ortholog_one2one 1 retrogene
retro_ggor_269,
Macaca mulatta ENSMMUG00000016398 ortholog_one2one 1 retrogene
retro_mmul_396,
Monodelphis domestica ENSMODG00000019731 ortholog_one2one 1 retrogene
retro_mdom_964,
Nomascus leucogenys ENSNLEG00000012775 ortholog_one2one 1 retrogene
retro_nleu_1000,
Tarsius syrichta ENSTSYG00000014113 ortholog_one2one 1 retrogene
retro_tsyr_1676,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_174 74.75 59.76
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Download FASTA sequences of all ENSCPOG00000008868 retrocopies