Parental gene:

ENSFCAG00000012812

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:C1:19007024..19010372(+)


>ENSFCAG00000012812
CTCCCTCCAGAGGAGGCTGAAGGGGATGCTAAAGGAGATAAAGCCAAGGTGAAGGATGAGCCACAGAGAAGATCTGCAAG
GTTATCTGCTGTAAGTAAACCTGCTCCTCCAAAGCCAGAGCCCAAACCTAAAAAGGCCCCTGCAAAGAAGGGAGAGAAGG
TACCCAAAGGGAAAAAGGGGAAAGCTGATGCTGGCAAGGATGGGAATAACCCAGCAGAGAATGGAGATGCCAAAACAGAC
CAGGCACAGAAAGCTGAAGGTGCCGGAGACGCCAAGTGA

Library Parental gene expression (RPM)
SRP017611_liver 23 .35 RPM
SRP017611_kidney 36 .48 RPM
SRP017611_brain 21 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000038104 possible_ortholog 7 retrogenes
Canis familiaris ENSCAFG00000023168 possible_ortholog 35 retrogenes
Dasypus novemcinctus ENSDNOG00000018469 possible_ortholog 56 retrogenes
Dipodomys ordii ENSDORG00000001787 possible_ortholog 3 retrogenes
Echinops telfairi ENSETEG00000013571 possible_ortholog 33 retrogenes
Homo sapiens ENSG00000198830 possible_ortholog 51 retrogenes
Gorilla gorilla ENSGGOG00000000971 possible_ortholog 11 retrogenes
Macropus eugenii ENSMEUG00000010966 ortholog_one2one 8 retrogenes
Mus musculus ENSMUSG00000003038 possible_ortholog 2 retrogenes
Otolemur garnettii ENSOGAG00000032571 possible_ortholog 14 retrogenes
Ochotona princeps ENSOPRG00000001616 possible_ortholog 5 retrogenes
Pongo abelii ENSPPYG00000001682 possible_ortholog 16 retrogenes
Pan troglodytes ENSPTRG00000000386 possible_ortholog 54 retrogenes
Pteropus vampyrus ENSPVAG00000017269 possible_ortholog 5 retrogenes
Sorex araneus ENSSARG00000013139 possible_ortholog 3 retrogenes
Sus scrofa ENSSSCG00000003555 possible_ortholog 3 retrogenes
Tupaia belangeri ENSTBEG00000016632 possible_ortholog 33 retrogenes
Tarsius syrichta ENSTSYG00000011519 possible_ortholog 42 retrogenes
Tursiops truncatus ENSTTRG00000005681 possible_ortholog 5 retrogenes
Vicugna pacos ENSVPAG00000008076 possible_ortholog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_4 90.22 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_fcat_530 53.93 94.57
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_fcat_1842 74.19 100.00
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSFCAG00000012812 retrocopies