Parental gene: | ENSFCAG00000010156 |
| Aliases: | None |
| Description: | None |
| Organism: | Cat (Felis catus) |
| Coordinates: | B4:83180789..83186313(-) |
>ENSFCAG00000010156
TCTCTTTTAGTCGATTCCCTGGACCCTGAAAAGCTATTACAATGCCCCTATGATAAAAACCACCAGATCAGGGCCTGCAG
GTTTCCTTATCATCTTATCAAGTGCAGAAAGAATCATCCTGATGTCGCAAACAAATTGGCTACTTGTCCCTTCAATGCTC
GCCACCAGGTTCCTCGGGCCGAAATCAGCCACCATATCTCAAGCTGTGACGATAAAAGTTGTATTGAGCAGGATGTTGTC
AACCAAACCAGGAACCTTGGACAAGAGACTCTGGCCGAGAGCACCTGGCAGTGCCCTCCTTGCGATGAAGACTGGGATAA
AGATCTGTGGGAACAGACCAGCACCCCGTTTGTCTGGGGCACAGCCAACTACTGTGGCAACAACAGCCCTGCAAGCAACA
CAGTTATGGAACATAAGAGTAACCTGGCTTCAGGCATGCGTGTTCCCAAGTCTCTGCCGTATGTTCTGCCGTGGAAAAAC
AATGGAAATGCACAGTAA
TCTCTTTTAGTCGATTCCCTGGACCCTGAAAAGCTATTACAATGCCCCTATGATAAAAACCACCAGATCAGGGCCTGCAG
GTTTCCTTATCATCTTATCAAGTGCAGAAAGAATCATCCTGATGTCGCAAACAAATTGGCTACTTGTCCCTTCAATGCTC
GCCACCAGGTTCCTCGGGCCGAAATCAGCCACCATATCTCAAGCTGTGACGATAAAAGTTGTATTGAGCAGGATGTTGTC
AACCAAACCAGGAACCTTGGACAAGAGACTCTGGCCGAGAGCACCTGGCAGTGCCCTCCTTGCGATGAAGACTGGGATAA
AGATCTGTGGGAACAGACCAGCACCCCGTTTGTCTGGGGCACAGCCAACTACTGTGGCAACAACAGCCCTGCAAGCAACA
CAGTTATGGAACATAAGAGTAACCTGGCTTCAGGCATGCGTGTTCCCAAGTCTCTGCCGTATGTTCTGCCGTGGAAAAAC
AATGGAAATGCACAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 0 .10 RPM |
| SRP017611_kidney | 0 .62 RPM |
| SRP017611_brain | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000014260 | ortholog_one2many | 3 retrogenes | |
| Ailuropoda melanoleuca | ENSAMEG00000000939 | ortholog_one2one | 6 retrogenes | |
| Bos taurus | ENSBTAG00000018085 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000006465 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000001659 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000018968 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000001438 | ortholog_one2many | 4 retrogenes | |
| Equus caballus | ENSECAG00000013618 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000009310 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000031316 | within_species_paralog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000016318 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000016206 | ortholog_many2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000008444 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012961 | ortholog_many2many | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000005669 | ortholog_one2many | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000017227 | ortholog_one2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000036831 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000004679 | ortholog_one2many | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000004470 | ortholog_one2many | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000007016 | ortholog_one2many | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_557 | 75.15 | 98.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_940 | 77.27 | 66.06 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_fcat_1252 | 75.00 | 66.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_fcat_1302 | 90.74 | 64.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_fcat_1543 | 85.98 | 98.18 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000010156 retrocopies