Parental gene: | GTSF1, ENSAMEG00000000939 |
| Aliases: | None |
| Description: | gametocyte specific factor 1 [Source:HGNC Symbol;Acc:26565] |
| Organism: | Panda (Ailuropoda melanoleuca) |
| Coordinates: | GL193035.1:727780..733996(-) |
>ENSAMEG00000000939
TCAGGAACTACTTACAGCATCGATTCCCTGGACCCTGAAAAGCTATTACAATGCCCCTATGATAAAAACCACCAGATCAG
GGCCTGCAGGTTTCCTTATCATCTTATCAAGTGCAGAAAGAATCATCCTGATGTCGCAAACAAATTGGCTACTTGTCCCT
TCAATGCTCGCCACCAGGTTCCTCGGGCCGAAATCAGTCATCATATCTCAAGCTGTGATGATAAAAGTTATATAGAGCAG
GATGTTGTCAACCAGACCAGGAACCTTGGACAAGAGACTCTGGCTGAGAGCACATGGCAGTGCCCTCCTTGCGACGAAGA
CTGGGATAAAGATCTGTGGGAACAGACCAGCACCCCATTTGTCTGGGGCACAGCCAACTACTGTGGCAACAACAGCCCTG
CAAGCAACATAGTTATGGAACATAAGAGTAACCTGGCTTCGGGCATGCGCGTTCCCAAGTCTCTGCCGTATGTTCTGCCG
TGGAAAAACAATGGAAATGCACAGTAA
TCAGGAACTACTTACAGCATCGATTCCCTGGACCCTGAAAAGCTATTACAATGCCCCTATGATAAAAACCACCAGATCAG
GGCCTGCAGGTTTCCTTATCATCTTATCAAGTGCAGAAAGAATCATCCTGATGTCGCAAACAAATTGGCTACTTGTCCCT
TCAATGCTCGCCACCAGGTTCCTCGGGCCGAAATCAGTCATCATATCTCAAGCTGTGATGATAAAAGTTATATAGAGCAG
GATGTTGTCAACCAGACCAGGAACCTTGGACAAGAGACTCTGGCTGAGAGCACATGGCAGTGCCCTCCTTGCGACGAAGA
CTGGGATAAAGATCTGTGGGAACAGACCAGCACCCCATTTGTCTGGGGCACAGCCAACTACTGTGGCAACAACAGCCCTG
CAAGCAACATAGTTATGGAACATAAGAGTAACCTGGCTTCGGGCATGCGCGTTCCCAAGTCTCTGCCGTATGTTCTGCCG
TGGAAAAACAATGGAAATGCACAGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000014260 | ortholog_one2one | 3 retrogenes | |
| Ailuropoda melanoleuca | ENSAMEG00000000958 | within_species_paralog | 1 retrogene | |
| Bos taurus | ENSBTAG00000018085 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000006465 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000001659 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000018968 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000001438 | ortholog_one2one | 4 retrogenes | |
| Equus caballus | ENSECAG00000013618 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000009310 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000010156 | ortholog_one2one | 5 retrogenes | |
| Loxodonta africana | ENSLAFG00000016318 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000016206 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000008444 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012961 | ortholog_one2many | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000005669 | ortholog_one2many | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000017227 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000036831 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000004679 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000004470 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000007016 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_amel_324 | 81.45 | 73.21 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_amel_338 | 81.91 | 55.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_amel_639 | 73.77 | 72.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_amel_724 | 76.87 | 77.38 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_amel_796 | 76.54 | 95.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_amel_1420 | 63.25 | 69.05 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSAMEG00000000939 retrocopies