Parental gene: | SPIC, ENSETEG00000004217 |
| Aliases: | None |
| Description: | Spi-C transcription factor (Spi-1/PU.1 related) [Source:HGNC Symbol;Acc:29549] |
| Organism: | Lesser hedgehog tenrec (Echinops telfairi) |
| Coordinates: | GeneScaffold_6298:2941..12480(+) |
>ENSETEG00000004217
ATGGCTTGTAGTGAACAAGACAAGCTGGGACAAGCATTTGAAGATGCTTTTGATGTGTTGAGGCAACATTCAGCAGGCAA
CCTTCAGTGCGCTCCAGACTACAAAAATTACCTGGCTTTCATCAACCACTGCGCTCAGGTCCAAGGGAGCCCCAGCTGCC
TTGGAGTGCTGCCGGCAGAGGAACCTGCCTGTACCTGGAAAGCCATCATCAACAATGTTGCAGACTACTGTGTGGAAGCA
AATATCCATCCATCCCTGCAGAATGTCGCTGAAAACCAGCTAATGCAACCTGCCGCTCTCCAGCAAAAGGTCGGAAAAGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCCCTGTGTAACCCGGAGATGGCTTCTTGTATCTCGTGGGTAG
ATAGAAGCAAGGGCATCTTTCAGTTCATGTCAAAAAACAAAGAGATACTTGCCAGGGCATTGCAAAATTATGGAGGAACT
GGGGAAACCATCAAAATCTGGAAACTACCTTACCAGTTCAGTGAGGCCACTCTCCAAAGACTTTCTCCCTCTTATTTCTT
GGGAAAAGAGGTCTTCTACTCACCGTGCATCCAACCTAAACAAGAATATCTCGGTTTAAATAATTGGAATGCAAGCTATA
ATCATCCATGTACCAACTACCATGAGCTAAATGACCCTGATTGCTAG
ATGGCTTGTAGTGAACAAGACAAGCTGGGACAAGCATTTGAAGATGCTTTTGATGTGTTGAGGCAACATTCAGCAGGCAA
CCTTCAGTGCGCTCCAGACTACAAAAATTACCTGGCTTTCATCAACCACTGCGCTCAGGTCCAAGGGAGCCCCAGCTGCC
TTGGAGTGCTGCCGGCAGAGGAACCTGCCTGTACCTGGAAAGCCATCATCAACAATGTTGCAGACTACTGTGTGGAAGCA
AATATCCATCCATCCCTGCAGAATGTCGCTGAAAACCAGCTAATGCAACCTGCCGCTCTCCAGCAAAAGGTCGGAAAAGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCCCTGTGTAACCCGGAGATGGCTTCTTGTATCTCGTGGGTAG
ATAGAAGCAAGGGCATCTTTCAGTTCATGTCAAAAAACAAAGAGATACTTGCCAGGGCATTGCAAAATTATGGAGGAACT
GGGGAAACCATCAAAATCTGGAAACTACCTTACCAGTTCAGTGAGGCCACTCTCCAAAGACTTTCTCCCTCTTATTTCTT
GGGAAAAGAGGTCTTCTACTCACCGTGCATCCAACCTAAACAAGAATATCTCGGTTTAAATAATTGGAATGCAAGCTATA
ATCATCCATGTACCAACTACCATGAGCTAAATGACCCTGATTGCTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009904 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000001906 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000004496 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000009614 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000166211 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000024597 | ortholog_one2one | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000015661 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000011052 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020873 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000006232 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000008070 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000015148 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004873 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000005351 | ortholog_one2one | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000005720 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000015457 | ortholog_one2many | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000017205 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_etel_593 | 73.18 | 78.07 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_etel_929 | 65.03 | 62.72 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_etel_933 | 78.70 | 74.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_etel_1675 | 77.51 | 74.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_etel_2007 | 88.46 | 57.02 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_etel_2008 | 69.23 | 62.72 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSETEG00000004217 retrocopies