Parental gene:

UBA52, ENSETEG00000003392

Aliases:None
Description:ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458]
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:scaffold_316468:11220..13255(+)


>ENSETEG00000003392
ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGGAGCCCAGCGACACCATCGAGAATGTCAA
AGCCAAAATCCAAGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATTTTTGCTGGTAAACAGCTGGAGGATGGCC
GCACTCTCTCGGACTACAACATCCAGAAAGAGTCCACCCTGCACTTGGTGCTGCGTCTGCGTGGTGGTATCATCGAGCCG
TCCCTGCGCCAGCTGGCCCAGAAGTACAACTGCGACAAGATGATCTGCCGCAAGTGTTATGCTCGCCTTCACCCCCGTGC
AGTTAACTGCCGCAAGAAGAAGTGTGGCCACACCAACAACCTGCGTCCCAAGAAGAAGGTCAAATAA

Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000000351 ortholog_one2one 3 retrogenes
retro_cpor_1454, retro_cpor_1471, retro_cpor_1502,
Gorilla gorilla ENSGGOG00000004630 ortholog_one2one 8 retrogenes
retro_ggor_1021, retro_ggor_1045, retro_ggor_1265, retro_ggor_1835, retro_ggor_2579, retro_ggor_2687, retro_ggor_2782, retro_ggor_905,
Latimeria chalumnae ENSLACG00000008132 ortholog_one2many 1 retrogene
retro_lcha_11,
Macropus eugenii ENSMEUG00000013159 ortholog_one2one 5 retrogenes
retro_meug_1812, retro_meug_1868, retro_meug_441, retro_meug_513, retro_meug_750,
Myotis lucifugus ENSMLUG00000029594 ortholog_one2one 5 retrogenes
retro_mluc_1995, retro_mluc_2057, retro_mluc_2203, retro_mluc_44, retro_mluc_829,
Macaca mulatta ENSMMUG00000016085 ortholog_one2one 7 retrogenes
retro_mmul_1184, retro_mmul_1580, retro_mmul_1625, retro_mmul_2183, retro_mmul_2311, retro_mmul_232, retro_mmul_896,
Mustela putorius furo ENSMPUG00000015527 possible_ortholog 8 retrogenes
retro_mputfur_1059, retro_mputfur_1119, retro_mputfur_1126, retro_mputfur_382, retro_mputfur_516, retro_mputfur_713, retro_mputfur_78, retro_mputfur_945,
Mus musculus ENSMUSG00000090137 ortholog_one2one 3 retrogenes
retro_mmus_101, retro_mmus_129, retro_mmus_31,
Pongo abelii ENSPPYG00000009746 possible_ortholog 2 retrogenes
retro_pabe_111, retro_pabe_3291,
Pteropus vampyrus ENSPVAG00000024217 ortholog_one2one 19 retrogenes
retro_pvam_1029, retro_pvam_1102, retro_pvam_1146, retro_pvam_1164, retro_pvam_1320, retro_pvam_1325, retro_pvam_1361, retro_pvam_1434, retro_pvam_1447, retro_pvam_211, retro_pvam_327, retro_pvam_517, retro_pvam_528, retro_pvam_600, retro_pvam_632, retro_pvam_655, retro_pvam_749, retro_pvam_987, retro_pvam_994,
Ictidomys tridecemlineatus ENSSTOG00000004678 possible_ortholog 1 retrogene
retro_itri_49,
Xiphophorus maculatus ENSXMAG00000003911 ortholog_one2one 1 retrogene
retro_xmac_6,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_70 84.21 59.38
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2. retro_etel_113 82.41 81.25
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3. retro_etel_174 87.01 60.16
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4. retro_etel_196 96.12 100.00
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5. retro_etel_268 69.81 81.25
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6. retro_etel_376 86.49 57.03
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7. retro_etel_386 84.00 58.59
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8. retro_etel_406 89.60 97.66
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9. retro_etel_660 73.97 56.25
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10. retro_etel_690 85.90 59.38
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11. retro_etel_755 80.47 98.44
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12. retro_etel_807 90.91 60.16
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13. retro_etel_843 83.33 59.38
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14. retro_etel_859 94.44 56.25
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15. retro_etel_1121 67.95 60.94
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16. retro_etel_1165 85.71 59.38
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17. retro_etel_1229 98.70 60.16
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18. retro_etel_1520 80.15 100.00
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19. retro_etel_1521 60.00 70.31
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20. retro_etel_1598 89.61 59.38
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21. retro_etel_1618 71.57 78.91
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22. retro_etel_1623 75.76 77.34
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23. retro_etel_1644 76.81 53.91
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24. retro_etel_1657 65.00 76.56
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25. retro_etel_1707 67.09 59.38
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26. retro_etel_1709 73.47 75.00
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27. retro_etel_1756 88.16 59.38
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28. retro_etel_1760 93.80 100.00
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29. retro_etel_1785 77.63 58.59
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30. retro_etel_1854 90.79 59.38
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31. retro_etel_2027 75.32 60.16
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32. retro_etel_2101 62.40 96.09
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33. retro_etel_2123 79.22 59.38
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34. retro_etel_2158 88.37 100.00
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35. retro_etel_2166 92.11 59.38
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Download FASTA sequences of all ENSETEG00000003392 retrocopies