Parental gene:

ENSEEUG00000014393

Aliases:None
Description:None
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:scaffold_307763:3..10652(-)


>ENSEEUG00000014393
ATGGAACCCACAGCCATCCCTGTCAATCTGGCCCTGAAAGAAGAAAAAGAGGAAGAAGAGATTCAGAGCCAGGAGCTGGA
GGATGGTCCTACAGAGATGCAGAAAGTCCGGATCTGCTCAGAGGGTGGATGGTTGCCAGCCCTAGATGAGGTGCCCATAT
ATTTTGATGAAGAGGAAGTTTTGACAGAGCAACAAAAGGCCCTGTACCGGGAAGTCATGAGGATGAATTATGAGACTGTT
CTGTCCCTGGAGTTCCCATTCCCTAAGCCAGATGTGATCACTCGGCTGGAAAGAGAGAAATCTCAAAACTCTAATGAACG
GCAGCTCCAAGGACACACCATTGCAGAAAATGAAGATTTGGAAATGAAGGCTCCAGACTGGGCAGGCCCAGTGAACACTT
CCTCCCAGCTTTCTCAGCCTCAGCACCTGGATAGTTTTGGCCTCCGTCTAACTCAGGACATCACAGAGCTGCCTGAGTGG
GGTGAAGGATACCCCTTTTACATGGGATTCCCAGGGTATGATCTTTCTGCGGAAGACCTGGCAGCGAAGTTCCAGTTCAG
CCGGGGCATGCGGCGCAGTTATGATGCTGGGTTCAAGTTGATGGTGGTGGAATATGCTGAAAGTACCAACAACTGTCAGG
CAGCGAAGCAGTTTGGCGTGCTGGAAAAAAATGTGCGGGACTGGCGCAAAGTGAAGCCACAGCTACAAAATGCCCATGCC
ATGCGGCGGGCATTCCGAGGCCCCAAGAATGGACGGTTTGCCCTGGTGGACCAGCGTGTGGCTGAATATGTGCGCTACAT
GCAGGCCAAAGGAGACCCTATCACCCGGGAGGCCATGCAGTTGAAAGCCCTCGAAATTGCCCAGGAAATGAACATTCCAG
AGAAAGGGTTCAAGGCCAGTTTGGGTTGGTGTCGAAGAATGATGCGACGTTATGACTTATCTCTGAGGCACAAGGTGCAT
GTACCCCAGCAGCTACTCGAAGACCTGACTGAAAAACTTGTCACTTACCAGCGGAGTGTCCTGGCCCTGCGCAGGACACA
TGACTACCAGGTGGCACAGATGGGCAATGCAGATGAGACTCCAATTTGTTTAGAAGTGCCATCTCGGGTGACTGTTGACA
ACCAGGGTGAGAAGCCTGTCTTGGTCAAGACGCCAGGCAGGGAGAAACTGAAAATCACTGCCATGCTTGGGGTTCTGGCT
GATGGGAGAAAACTGCCCCCATACATCATTCTGAGGGGCACATACATCCCCCCTGGGAAGTTCCCTAGTGGGATGGAAAT
CCGCTGCCACAGGTATGGATGGATGACGGAGGATTTGATGCAGGATTGG

Library Parental gene expression (RPM)
SRP017611_liver 1 .61 RPM
SRP017611_kidney 7 .88 RPM
SRP017611_brain 13 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000033914 ortholog_one2many 1 retrogene
retro_cjac_2779,
Dipodomys ordii ENSDORG00000006822 ortholog_one2many 1 retrogene
retro_dord_612,
Latimeria chalumnae ENSLACG00000014539 possible_ortholog 1 retrogene
retro_lcha_56,
Mus musculus ENSMUSG00000040596 ortholog_one2many 1 retrogene
retro_mmus_2572,
Otolemur garnettii ENSOGAG00000007615 ortholog_one2many 1 retrogene
retro_ogar_2784,
Tarsius syrichta ENSTSYG00000011078 ortholog_one2many 1 retrogene
retro_tsyr_1983,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_21 95.52 90.07
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Download FASTA sequences of all ENSEEUG00000014393 retrocopies