Parental gene: | POGK, ENSCJAG00000033914 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 18:39371117..39385826(-) |
>ENSCJAG00000033914
ATGGAGTCCGCAGCCTATCCTCTCAATTTGACCCTGAAAGAAGAGGAAGAGGAAGAAGAGATTCAGAGCCGGGAACTGGA
GGACGGCCCCGTTGTCATGCAGAAAGTCCGAATCTGCTCTGAGGGCGGATGGGTACCAGCCCTGTTTGATGAGGTGGCCA
TATATTTTTCCGATGAGGAGTGGGAAGTTTTGACGGAGCAACAAAAGGCCCTGTACCGGGAAGTCATGAGGATGAATTAT
GAAACCGTCCTGTCCCTGGAATTCCCATTCCCTAAGCCAGACATGATCACCCGGTTGGAAGGGGAGGAGGAGTCTCAGAA
TTCTGACGAGTGGCAACTCCAAGGAGGCACCTCTGCAGAAAATGAAGAATCTGACGTCAAGCCTCCAGACTGGCCAAGCC
CAGTGAATGCTACCTCCCACTTTCCTCAGCCTCAGCACTTCGACAGCTTTGGCCTCCGTCTGCCTCGGGATATCACAGAG
CTGCCTGAGTGGAGTGAGGGGTACCCCTTCTACATGGCCATGGGCTTCCCAGGGTATGACCTCTCAGCTGACGACATAGC
TGGGAAGTTTCAGTTCAGCCGGGGCATGCGCCGCAGTTACGACGCAGGGTTCAAGCTGATGGTGGTG
ATGGAGTCCGCAGCCTATCCTCTCAATTTGACCCTGAAAGAAGAGGAAGAGGAAGAAGAGATTCAGAGCCGGGAACTGGA
GGACGGCCCCGTTGTCATGCAGAAAGTCCGAATCTGCTCTGAGGGCGGATGGGTACCAGCCCTGTTTGATGAGGTGGCCA
TATATTTTTCCGATGAGGAGTGGGAAGTTTTGACGGAGCAACAAAAGGCCCTGTACCGGGAAGTCATGAGGATGAATTAT
GAAACCGTCCTGTCCCTGGAATTCCCATTCCCTAAGCCAGACATGATCACCCGGTTGGAAGGGGAGGAGGAGTCTCAGAA
TTCTGACGAGTGGCAACTCCAAGGAGGCACCTCTGCAGAAAATGAAGAATCTGACGTCAAGCCTCCAGACTGGCCAAGCC
CAGTGAATGCTACCTCCCACTTTCCTCAGCCTCAGCACTTCGACAGCTTTGGCCTCCGTCTGCCTCGGGATATCACAGAG
CTGCCTGAGTGGAGTGAGGGGTACCCCTTCTACATGGCCATGGGCTTCCCAGGGTATGACCTCTCAGCTGACGACATAGC
TGGGAAGTTTCAGTTCAGCCGGGGCATGCGCCGCAGTTACGACGCAGGGTTCAAGCTGATGGTGGTG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 4 .18 RPM |
| SRP051959_skeletal_muscle | 1 .59 RPM |
| SRP051959_lymph_node | 5 .14 RPM |
| SRP051959_lung | 4 .72 RPM |
| SRP051959_liver | 2 .69 RPM |
| SRP051959_kidney | 5 .21 RPM |
| SRP051959_heart | 4 .21 RPM |
| SRP051959_colon | 3 .04 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dipodomys ordii | ENSDORG00000006822 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000014393 | ortholog_one2many | 1 retrogene | |
| Latimeria chalumnae | ENSLACG00000014539 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000040596 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000007615 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000011078 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2779 | 90.32 | 89.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000033914 retrocopies