Parental gene: | TPGS2, ENSEEUG00000005257 |
| Aliases: | None |
| Description: | tubulin polyglutamylase complex subunit 2 [Source:HGNC Symbol;Acc:24561] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_3829:4937..13372(-) |
>ENSEEUG00000005257
TCTTCCCCAGGTGTGACAGAGGTGACCATCTTAGAGAAAGCACCTGCTGAACGTCATATGATTTCTTCATGGGAACAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGTGAAAACCAGCCAGAGAAACC
TCACTTTGATTCACGCAGTGTGATATTTGAGCTGGATCCTTGCAGTGGACATGGGAAGGTTTGTCTTGTCTACAAAAGAG
GGAAACCAGGCTTGGCACAAGACTCTGAGATCTGGTTCCTGGACAGAGCACTGTACTGGCATTTTCTCACAGACACCTTT
ACAGCCTATTACCGTCTGCTTGTTACCCACCTAGGCCTGCCCCAGTGGCAGTATGCCTTCACCAGCTATGGCGTTAGCCC
ACAAGCTAAGCAATGGTTCAACATGTACAAACCCATAACATACAACACTAACCTGTTAATGGAAGAGGCTGACTCCTTTG
TGAACAAGCTGGATCCCAGCAAAGTGTTTAAGAGCAAGAACAAGACCTTGGTCCCCAAGAAGAAAGGGCCTGTTCAGCCT
GCCAACAGCCAGAAAGGACCCTCATCCTCCACTTCCAAATCTTCTTCTGGCTCTGGAAACACTGTCCGAAAATGA
TCTTCCCCAGGTGTGACAGAGGTGACCATCTTAGAGAAAGCACCTGCTGAACGTCATATGATTTCTTCATGGGAACAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGTGAAAACCAGCCAGAGAAACC
TCACTTTGATTCACGCAGTGTGATATTTGAGCTGGATCCTTGCAGTGGACATGGGAAGGTTTGTCTTGTCTACAAAAGAG
GGAAACCAGGCTTGGCACAAGACTCTGAGATCTGGTTCCTGGACAGAGCACTGTACTGGCATTTTCTCACAGACACCTTT
ACAGCCTATTACCGTCTGCTTGTTACCCACCTAGGCCTGCCCCAGTGGCAGTATGCCTTCACCAGCTATGGCGTTAGCCC
ACAAGCTAAGCAATGGTTCAACATGTACAAACCCATAACATACAACACTAACCTGTTAATGGAAGAGGCTGACTCCTTTG
TGAACAAGCTGGATCCCAGCAAAGTGTTTAAGAGCAAGAACAAGACCTTGGTCCCCAAGAAGAAAGGGCCTGTTCAGCCT
GCCAACAGCCAGAAAGGACCCTCATCCTCCACTTCCAAATCTTCTTCTGGCTCTGGAAACACTGTCCGAAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 4 .02 RPM |
| SRP017611_kidney | 16 .69 RPM |
| SRP017611_brain | 52 .21 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000017766 | ortholog_one2one | 3 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000007960 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000001739 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000001097 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000024269 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000008218 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000014957 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000026953 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000005299 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000007153 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_208 | 77.64 | 60.61 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_324 | 63.89 | 53.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_eeur_516 | 79.19 | 56.44 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000005257 retrocopies