Parental gene:

RPS28, ENSECAG00000017256

Aliases:None
Description:ribosomal protein S28 [Source:HGNC Symbol;Acc:10418]
Organism:Horse (Equus caballus)
Coordinates:7:5551778..5552807(+)


>ENSECAG00000017256
ATGGACACGAGTCGTGTGCAGCCCATCAAACTGGCCAGGGTCACCAAGGTGCTGGGCAGGACCGGCTCGCAGGGACAGTG
CACGCAGGTGCGCGTGGAATTTATGGACGACACGAGCCGCTCCATCATCCGCAACGTGAAAGGCCCCGTGCGCGAGGGCG
ACGTGCTCACCCTGTTGGAGTCAGAGCGAGAGGCCCGGAGGCTGCGCTGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 465 .23 RPM
SRP021940_embryo 496 .88 RPM
SRP021940_cerebellum 276 .28 RPM
SRP021940_testis 287 .11 RPM
SRP021940_placental_villous 281 .93 RPM
SRP021940_articular_cartilage 473 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004917 ortholog_one2one 1 retrogene
retro_amel_1359,
Bos taurus ENSBTAG00000002468 ortholog_one2one 1 retrogene
retro_btau_1130,
Cavia porcellus ENSCPOG00000022876 ortholog_one2one 5 retrogenes
retro_cpor_1092, retro_cpor_1485, retro_cpor_1504, retro_cpor_176, retro_cpor_702,
Loxodonta africana ENSLAFG00000029923 ortholog_one2one 2 retrogenes
retro_lafr_168, retro_lafr_755,
Myotis lucifugus ENSMLUG00000023621 ortholog_one2one 1 retrogene
retro_mluc_2040,
Macaca mulatta ENSMMUG00000028895 ortholog_one2one 3 retrogenes
retro_mmul_122, retro_mmul_182, retro_mmul_807,
Monodelphis domestica ENSMODG00000003890 possible_ortholog 1 retrogene
retro_mdom_291,
Mus musculus ENSMUSG00000067288 possible_ortholog 3 retrogenes
retro_mmus_2949, retro_mmus_3283, retro_mmus_91,
Rattus norvegicus ENSRNOG00000042886 possible_ortholog 2 retrogenes
retro_rnor_95, retro_rnor_96,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_725 71.70 76.81
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Download FASTA sequences of all ENSECAG00000017256 retrocopies