Parental gene:

COX11, ENSDNOG00000014862

Aliases:None
Description:cytochrome c oxidase assembly homolog 11 (yeast) [Source:HGNC Symbol;Acc:2261]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_3670:134460..140828(-)


>ENSDNOG00000014862
ATGGAAGAGTTATGCCGTCTGAGATGGAAGTGCGTCGCTCTGTGCGGTTGGCGATGGAGTCACCCTAGGTACCCAGCCAA
GGTTGAAAGGAGGGTAGAGCCATTTCTCAGGCCGAGATGGTGTGGGACAGGAGGTGCTGAAGGTCTTAGGCAGCTCAGGA
CGTGGGGGCGCTCAAGCCTGGCCCGGGACCTGGCGGTGCAGCCGCTGCGGCGGCCGAAGAGCACGAACCCATTCTCGCGT
GCGCAGGAGGAGGACTGGAGGCGGCGGAATAAGACGGTCCTCACGTACGTGGCCGCAGCTGCAGTGGGCATGCTGGGGGC
CTCTTATGCCGCCGTCCCCCTCTATCGGCTCTATTGCCAGACCACAGGACTTGGGGGATCTGCAGTTGCAGGTCATGCAT
CAGACCAGATTGAAGCCATGAGGCCTGTTAAGGATCGCATCATTAAAGTTACCTTTAATGCAGATGTGCATGCAAGTCTC
CAGTGGAACTTTAGACCTCAGCAAACAGAGATATATGTAGTGCCAGGAGAGACTGCACTGGCGTTTTATAAAGCTAAAAA
TCCTACTGACAAACCAGTAATCGGAATTTCTACATACAATGTTGTGCCATTTGAAGCTGGACAGTATTTCAATAAAATAC
AGTGCTTCTGTTTTGAAGAACAAAGGCTTAATCCACAAGAGGAAGTCGATATGCCAGTGTTTTTCTACATTGATCCTGAA
TTTGCTGAAGATCCAAGAATGGTGAATGTTGATCTCATCACTCTTTCTTATACTTTTTTTGAAGCAAAGGAAGGGCACAA
GTTGCCAGTTCCAGGCTATAATTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 30 .34 RPM
SRP012922_cerebellum 19 .93 RPM
SRP012922_heart 18 .33 RPM
SRP012922_kidney 29 .30 RPM
SRP012922_liver 21 .98 RPM
SRP012922_lung 28 .41 RPM
SRP012922_quadricep_muscle 21 .81 RPM
SRP012922_spleen 21 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000008482 ortholog_one2one 1 retrogene
retro_cpor_1340,
Dipodomys ordii ENSDORG00000001207 ortholog_one2one 1 retrogene
retro_dord_180,
Homo sapiens ENSG00000166260 ortholog_one2one 1 retrogene
retro_hsap_3442,
Microcebus murinus ENSMICG00000005225 ortholog_one2one 1 retrogene
retro_mmur_1119,
Monodelphis domestica ENSMODG00000014855 ortholog_one2one 1 retrogene
retro_mdom_952,
Mus musculus ENSMUSG00000020544 ortholog_one2one 4 retrogenes
retro_mmus_1318, retro_mmus_2318, retro_mmus_2714, retro_mmus_986,
Nomascus leucogenys ENSNLEG00000007990 ortholog_one2one 1 retrogene
retro_nleu_2297,
Ochotona princeps ENSOPRG00000004138 ortholog_one2one 1 retrogene
retro_opri_441,
Pongo abelii ENSPPYG00000008259 ortholog_one2many 2 retrogenes
retro_pabe_156, retro_pabe_2847,
Pan troglodytes ENSPTRG00000009422 ortholog_one2one 1 retrogene
retro_ptro_2335,
Rattus norvegicus ENSRNOG00000046318 ortholog_one2many 1 retrogene
retro_rnor_1515,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1933 66.17 70.07
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Download FASTA sequences of all ENSDNOG00000014862 retrocopies