Parental gene:

COX11, ENSCPOG00000008482

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_53:3788598..3794845(+)


>ENSCPOG00000008482
GGAGGGGTCTGGGGTCTGAAATGGAAACGTGTTGTTTTCTGTGGCTGGAGTTGGGGTCACCTCGGCTCCTTGACCAGGAC
TGCGGAACAGATAGAGCCGTTTCTTCTGCCGGGATGGAGAGGGACGGGAGTTGCTGACAGAGGACTGAGGCGGCTTGGGA
CATGGAAACGTCCGAGCCCGGCCCGGGGTCCGACCGCGGAGCAGCAGTGGCGGCCGAAAAGCACGAACCCTTTCACGCGT
GCACAGGAAGAGGACTGGCGGCGAAGGAACAAGACGGTGCTCACATACGTGGCCGCGGCCGCGGTGGGCATGCTGGGGGC
CTCCTACGCCGCGGTGCCCCTGTATCGGCTCTACTGCCAGACTACTGGACTTGGAGGATCAGCAGTAGCAGGTCATGGAT
CAGACCAGATTGAAAGCATGGTGCCTGTTAAAGACCGAATCATCAAGGTGACCTTCAATGCAGATGTCCACGCCAGTCTC
CAATGGAACTTTAGACCTCAGCAATCAGAAATATATGTGGTGCCAGGAGAGACTGCGCTGGCATTTTATAAAGCCAGGAA
TCCTACCGACAAACCAGTAATTGGAATTTCTACATATAATGTGGTACCATTTGAAGCTGGACAGTATTTTAATAAAATAC
AGTGCTTCTGTTTTGAAGAACAAAGACTTAACCCCCAAGAAGAAGTGGATATGCCAGTGTTTTTCTACATTGATCCTGAA
TTTGCAGAAGATCCAAGAATGGTGAACGTTGATCTTATCACTCTTTCTTACACTTTTTTTGAAGCCAAGGAAGGGCAGAA
GTTGCCACTTCCAGGTTATAACTGA

Library Parental gene expression (RPM)
SRP017611_liver 13 .62 RPM
SRP017611_kidney 21 .15 RPM
SRP017611_brain 8 .17 RPM
SRP040447_lung 5 .93 RPM
SRP040447_skeletal_muscle 10 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000014862 ortholog_one2one 1 retrogene
retro_dnov_1933,
Dipodomys ordii ENSDORG00000001207 ortholog_one2one 1 retrogene
retro_dord_180,
Homo sapiens ENSG00000166260 ortholog_one2one 1 retrogene
retro_hsap_3442,
Microcebus murinus ENSMICG00000005225 ortholog_one2one 1 retrogene
retro_mmur_1119,
Monodelphis domestica ENSMODG00000014855 ortholog_one2one 1 retrogene
retro_mdom_952,
Mus musculus ENSMUSG00000020544 ortholog_one2one 4 retrogenes
retro_mmus_1318, retro_mmus_2318, retro_mmus_2714, retro_mmus_986,
Nomascus leucogenys ENSNLEG00000007990 ortholog_one2one 1 retrogene
retro_nleu_2297,
Ochotona princeps ENSOPRG00000004138 ortholog_one2one 1 retrogene
retro_opri_441,
Pongo abelii ENSPPYG00000008259 ortholog_one2many 2 retrogenes
retro_pabe_156, retro_pabe_2847,
Pan troglodytes ENSPTRG00000009422 ortholog_one2one 1 retrogene
retro_ptro_2335,
Rattus norvegicus ENSRNOG00000046318 ortholog_one2many 1 retrogene
retro_rnor_1515,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1340 53.07 64.23
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Download FASTA sequences of all ENSCPOG00000008482 retrocopies