Parental gene: | CFDP1, ENSDNOG00000013266 |
| Aliases: | None |
| Description: | craniofacial development protein 1 [Source:HGNC Symbol;Acc:1873] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_7417:38528..88460(-) |
>ENSDNOG00000013266
ATGGAGGAATTCGACTCCGAAGACTTCTCCACCTCGGAGGAGGACGAGGACTACGTGCCTTCGGGTGGAGAGTATAGTGA
AGATGATGTAAATGAATTAGTGAAGGAAGATGAAGTGGATGGTGAAGAGCAGACACAGAAAACGAAAGGGAAAAAAAGAA
AGTCTCAGAGCATTCCATCCAGGAAGAGAAAACAAGGTGCCCTCTCATTAGATGATGAGGAAGAGGAAGATGCCAGTGCA
GAATCGGGAGGAAGTAGCAGTGAGGAGGAAGACACAGCTGCAGAGCAGGAAAAAGGCTTTGGGTCAGAAGATGCAAGAAA
AAAGAAGGAGGATGAACTCTGGGCCAGCTTTCTCAATGATGTGGGGCCCAAATCAAAAGTGCCCCCAAGTACACAAGTTA
AGAGAGGAGAAGAAACTGAAGAGATGAGTTCAAGTAAATTGTTGGTCAAAACAGAAGAGCTAGAGAAGCCTAAAGAAATA
GAAAAGGTTAAAATCACCAAGGTGTTTGATTTTGCTGGTGAAGAAGTCAGGACTAAAGAAGTGGATGCCACCTCCAGAGA
AGCCAAATCCTTCTTCAGGAATGAGAAGGAGAGGCCTCAAACTAACGGTCCTTCAGCGCTGTCATCAGCCCCTGCAGGGT
CAGGNNNNNNNNNNNNNNNNNNGGCCATAAGCAGCCTTCTTGAGAAAATTGGAGCCAAGAAGCAGAAAATGAGCACCGAG
AAATCCTTGGACTGGGAGAGCAAGGAGGAAGAGGGGATTGGTGAAGAACTGGCCATCCATAATCGAGGGAAAGAAGGGTA
CATTGAACGGAAAGCTTTTCTAGACCGAGTGGATCACAGGCAGTTTGAAATTGAACGAGATCTCAGGCTGAGCAAAATGA
AGCCTTGA
ATGGAGGAATTCGACTCCGAAGACTTCTCCACCTCGGAGGAGGACGAGGACTACGTGCCTTCGGGTGGAGAGTATAGTGA
AGATGATGTAAATGAATTAGTGAAGGAAGATGAAGTGGATGGTGAAGAGCAGACACAGAAAACGAAAGGGAAAAAAAGAA
AGTCTCAGAGCATTCCATCCAGGAAGAGAAAACAAGGTGCCCTCTCATTAGATGATGAGGAAGAGGAAGATGCCAGTGCA
GAATCGGGAGGAAGTAGCAGTGAGGAGGAAGACACAGCTGCAGAGCAGGAAAAAGGCTTTGGGTCAGAAGATGCAAGAAA
AAAGAAGGAGGATGAACTCTGGGCCAGCTTTCTCAATGATGTGGGGCCCAAATCAAAAGTGCCCCCAAGTACACAAGTTA
AGAGAGGAGAAGAAACTGAAGAGATGAGTTCAAGTAAATTGTTGGTCAAAACAGAAGAGCTAGAGAAGCCTAAAGAAATA
GAAAAGGTTAAAATCACCAAGGTGTTTGATTTTGCTGGTGAAGAAGTCAGGACTAAAGAAGTGGATGCCACCTCCAGAGA
AGCCAAATCCTTCTTCAGGAATGAGAAGGAGAGGCCTCAAACTAACGGTCCTTCAGCGCTGTCATCAGCCCCTGCAGGGT
CAGGNNNNNNNNNNNNNNNNNNGGCCATAAGCAGCCTTCTTGAGAAAATTGGAGCCAAGAAGCAGAAAATGAGCACCGAG
AAATCCTTGGACTGGGAGAGCAAGGAGGAAGAGGGGATTGGTGAAGAACTGGCCATCCATAATCGAGGGAAAGAAGGGTA
CATTGAACGGAAAGCTTTTCTAGACCGAGTGGATCACAGGCAGTTTGAAATTGAACGAGATCTCAGGCTGAGCAAAATGA
AGCCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 20 .61 RPM |
| SRP012922_cerebellum | 27 .22 RPM |
| SRP012922_heart | 11 .37 RPM |
| SRP012922_kidney | 20 .26 RPM |
| SRP012922_liver | 11 .46 RPM |
| SRP012922_lung | 20 .16 RPM |
| SRP012922_quadricep_muscle | 12 .46 RPM |
| SRP012922_spleen | 20 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000000695 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000016429 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000890 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019326 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000004124 | ortholog_one2many | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000015362 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000001215 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_2442 | 70.47 | 50.17 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_2546 | 70.56 | 70.85 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000013266 retrocopies