Parental gene:

OSTC, ENSDNOG00000011172

Aliases:None
Description:oligosaccharyltransferase complex subunit (non-catalytic) [Source:HGNC Symbol;Acc:24448]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:scaffold_4377:87568..93257(+)


>ENSDNOG00000011172
ATGGAGACTTTGTACCGAGTCCCATTCTTAGTGCTCGAATGTCCCAACCTGAAGCTGAAGAAGCCGCCTTGGGTGCACAT
GCCGTCGGCCATGACTGTGTATGCTCTGGTGGTGGTGTCGTACTTCCTCATCACCGGAGGAATAATTTATGATGTTATTG
TTGAACCTCCAAGTGTTGGTTCTATGACTGATGAACATGGGCATCAGAGGCCAGTAGCCTTTCTGGCCTACAGAGTAAAT
GGACAATATATTATGGAAGGACTTGCATCCAGCTTCCTGTTTACAATGGGAGGTTTAGGATTCATAATCTTGGACCGATC
CAATGCACCAAACATTCCAAAACTTAATAGATTTCTTCTCCTATTCATTGGATTCGTCTGTGTCCTATTGAGTTTTTTCA
TGGCTAGAGTATTCATGAGGATGAAACTA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 28 .39 RPM
SRP012922_cerebellum 6 .32 RPM
SRP012922_heart 5 .10 RPM
SRP012922_kidney 12 .05 RPM
SRP012922_liver 23 .07 RPM
SRP012922_lung 9 .16 RPM
SRP012922_quadricep_muscle 3 .98 RPM
SRP012922_spleen 14 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000011611 ortholog_one2one 1 retrogene
retro_btau_753,
Callithrix jacchus ENSCJAG00000016002 possible_ortholog 3 retrogenes
retro_cjac_121, retro_cjac_2981, retro_cjac_324,
Homo sapiens ENSG00000198856 ortholog_one2one 7 retrogenes
retro_hsap_1746, retro_hsap_2013, retro_hsap_2972, retro_hsap_3598, retro_hsap_3686, retro_hsap_376, retro_hsap_4246,
Gorilla gorilla ENSGGOG00000026873 possible_ortholog 6 retrogenes
retro_ggor_1457, retro_ggor_2060, retro_ggor_215, retro_ggor_2427, retro_ggor_370, retro_ggor_385,
Loxodonta africana ENSLAFG00000026381 ortholog_one2one 7 retrogenes
retro_lafr_1046, retro_lafr_17, retro_lafr_222, retro_lafr_231, retro_lafr_444, retro_lafr_549, retro_lafr_618,
Myotis lucifugus ENSMLUG00000000478 ortholog_one2one 2 retrogenes
retro_mluc_1366, retro_mluc_1511,
Monodelphis domestica ENSMODG00000020599 ortholog_one2one 1 retrogene
retro_mdom_428,
Oryctolagus cuniculus ENSOCUG00000011056 ortholog_one2one 2 retrogenes
retro_ocun_1318, retro_ocun_7,
Pan troglodytes ENSPTRG00000024222 ortholog_one2one 1 retrogene
retro_ptro_34,
Tursiops truncatus ENSTTRG00000003446 ortholog_one2one 1 retrogene
retro_ttru_582,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_12 90.00 69.93
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2. retro_dnov_1973 81.94 100.00
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Download FASTA sequences of all ENSDNOG00000011172 retrocopies