Parental gene: | ENSDNOG00000008718 |
| Aliases: | None |
| Description: | None |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_549:10060..21929(-) |
>ENSDNOG00000008718
GAGCGTGCTTTGGACACCATGAATTTTGATGTTATAAAGGGCAAGCCAGTACGCATCATGTGGTCTCAGCGTGATCCATC
CCTTCGCAAAAGTGGAGTGGGCAACATATTCATTAAAAATTTGGACAAATCTATTGATAATAAAGCACTGTATGATACAT
TTTCTGCTTTCGGTAACATCCTTTCATGTAAGGTGGTTTGTGATGAAAATGGATTCGGCTATGGATTTGTACATTTTGAG
ACACAGGCAGCTGAAAGAGCTATTAAAATGAATGGGATGCTTCTAAATGATCGCAAANNATTTGTTGGACGATTTAAGTC
TCGAAAAGAACGAGAAGCAGAACTTGGAGCTAGAGCAAAAGAGTTCACCAATGTTTACATCAAGAATTTTGGAGAAGACA
TGGATGATGAGCGCCTTAAGGATCTCTTTGGCAAGTTTGGACCTGCCTTAAGTGTGAAAGTAATGACTGATGAAAGTGGA
AAATCCAAAGGCTTTGGATTTGTGAGTTTCGAAAGGCATGAAGATGCACAGAAAGCTGTGGATGAGATGAATGGAAAGGA
GCTCAATGGGAAACAGATTTACGTTGGTCGAGCTCAGAAAAAAGTGGAACGACAGACAGAACTTAAGCGCAAATTTGAAC
AGATGAAGCAAGATAGGATCACCAGATATCAGGGTGTTAACCTTTATGTGAAAAATCTTGATGATGGTATTGATGATGAA
CGTCTCCGGAAAGAGTTTTCTCCATTTGGTACAATCACTAGTGCAAAGGTTATGATGGAGGGTGGTCGCAGCAAAGGATT
TGGTTTTGTATGTTTCTCCTCCCCAGAAGAAGCCACTAAAGCAGTTACAGAAATGAATGGTAGAATTGTGGCCACCAAGC
CATTGTATGTAGCTTTAGCTCAGCGCAAAGAAGAGCGCCAGGCTCACCTCACTAACCAGTATATGCAGAGAATGGCAAGT
GTAAGAGCTGTGCCCAACCCTGTAATCAACCCCTACCAGCCAGCACCTCCTTCAGGTTACTTCATGGCAGCTATTCCACA
GACTCAGAACCGTGCTGCATACTATCCTCCTAGCCAAATTGCTCAACTAAGACCAAGTCCTCGCTGGACTGCTCAGGGTG
CCNNNNNNNNNNCATTCCAAAATATGCCCGGTGCTATTCGCCCAGCCGCTCCTAGACCACCATTTAGTACTATGCGACCA
GCTTCTTCACAGGTTCCACGAGTTATGTCAACACAACGTGTTGCTAATACATCAACACAGACAATGGGTCCACGTCCTGC
GGCTGCTGCTGCTGCAGCTACTCCTGCTGTCCGTACTGTTCCACAGTATAAATATGCTGCAGGAGTTCGCAATCCACAAC
AACATCTTAATGCACAGCCACAAGTTACCATGCAGCAGCCTGCTGTTCATGTACAAGGTCAGGAACCTTTGACTGCTTCC
ATGTTGGCGTCTGCCCCTCCTCAAGAGCAAAAGCAGATGTTGGGTGAACGGCTCTTTCCTCTCATTCAAGCCATGCACCC
TACTTTGGCTGGCAAAATCACTGGCATGTTGTTGGAGATTGATAATTCAGAACTTCTTCATATGCTTGAGTCTCCAGAGT
CTCTCCGTTCTAAGGTAGATGAAGCTGTTGCTGTACTACAAGCCCACCAAGCTAAAGAGGCTGCCCAGAAAGCAGTTAAC
AGTGCCACTGGTGTTCCAACTGTTTAA
GAGCGTGCTTTGGACACCATGAATTTTGATGTTATAAAGGGCAAGCCAGTACGCATCATGTGGTCTCAGCGTGATCCATC
CCTTCGCAAAAGTGGAGTGGGCAACATATTCATTAAAAATTTGGACAAATCTATTGATAATAAAGCACTGTATGATACAT
TTTCTGCTTTCGGTAACATCCTTTCATGTAAGGTGGTTTGTGATGAAAATGGATTCGGCTATGGATTTGTACATTTTGAG
ACACAGGCAGCTGAAAGAGCTATTAAAATGAATGGGATGCTTCTAAATGATCGCAAANNATTTGTTGGACGATTTAAGTC
TCGAAAAGAACGAGAAGCAGAACTTGGAGCTAGAGCAAAAGAGTTCACCAATGTTTACATCAAGAATTTTGGAGAAGACA
TGGATGATGAGCGCCTTAAGGATCTCTTTGGCAAGTTTGGACCTGCCTTAAGTGTGAAAGTAATGACTGATGAAAGTGGA
AAATCCAAAGGCTTTGGATTTGTGAGTTTCGAAAGGCATGAAGATGCACAGAAAGCTGTGGATGAGATGAATGGAAAGGA
GCTCAATGGGAAACAGATTTACGTTGGTCGAGCTCAGAAAAAAGTGGAACGACAGACAGAACTTAAGCGCAAATTTGAAC
AGATGAAGCAAGATAGGATCACCAGATATCAGGGTGTTAACCTTTATGTGAAAAATCTTGATGATGGTATTGATGATGAA
CGTCTCCGGAAAGAGTTTTCTCCATTTGGTACAATCACTAGTGCAAAGGTTATGATGGAGGGTGGTCGCAGCAAAGGATT
TGGTTTTGTATGTTTCTCCTCCCCAGAAGAAGCCACTAAAGCAGTTACAGAAATGAATGGTAGAATTGTGGCCACCAAGC
CATTGTATGTAGCTTTAGCTCAGCGCAAAGAAGAGCGCCAGGCTCACCTCACTAACCAGTATATGCAGAGAATGGCAAGT
GTAAGAGCTGTGCCCAACCCTGTAATCAACCCCTACCAGCCAGCACCTCCTTCAGGTTACTTCATGGCAGCTATTCCACA
GACTCAGAACCGTGCTGCATACTATCCTCCTAGCCAAATTGCTCAACTAAGACCAAGTCCTCGCTGGACTGCTCAGGGTG
CCNNNNNNNNNNCATTCCAAAATATGCCCGGTGCTATTCGCCCAGCCGCTCCTAGACCACCATTTAGTACTATGCGACCA
GCTTCTTCACAGGTTCCACGAGTTATGTCAACACAACGTGTTGCTAATACATCAACACAGACAATGGGTCCACGTCCTGC
GGCTGCTGCTGCTGCAGCTACTCCTGCTGTCCGTACTGTTCCACAGTATAAATATGCTGCAGGAGTTCGCAATCCACAAC
AACATCTTAATGCACAGCCACAAGTTACCATGCAGCAGCCTGCTGTTCATGTACAAGGTCAGGAACCTTTGACTGCTTCC
ATGTTGGCGTCTGCCCCTCCTCAAGAGCAAAAGCAGATGTTGGGTGAACGGCTCTTTCCTCTCATTCAAGCCATGCACCC
TACTTTGGCTGGCAAAATCACTGGCATGTTGTTGGAGATTGATAATTCAGAACTTCTTCATATGCTTGAGTCTCCAGAGT
CTCTCCGTTCTAAGGTAGATGAAGCTGTTGCTGTACTACAAGCCCACCAAGCTAAAGAGGCTGCCCAGAAAGCAGTTAAC
AGTGCCACTGGTGTTCCAACTGTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 686 .47 RPM |
| SRP012922_cerebellum | 187 .10 RPM |
| SRP012922_heart | 94 .44 RPM |
| SRP012922_kidney | 326 .64 RPM |
| SRP012922_liver | 326 .33 RPM |
| SRP012922_lung | 609 .83 RPM |
| SRP012922_quadricep_muscle | 144 .53 RPM |
| SRP012922_spleen | 1051 .21 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000000348 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000008178 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000015833 | possible_ortholog | 5 retrogenes | |
| Cavia porcellus | ENSCPOG00000012917 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000001874 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000070756 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000006785 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012245 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017786 | possible_ortholog | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000006222 | ortholog_one2many | 4 retrogenes | |
| Mus musculus | ENSMUSG00000022283 | possible_ortholog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000004354 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018790 | possible_ortholog | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000008639 | possible_ortholog | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000011267 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000004229 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1530 | 67.68 | 51.41 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_2259 | 87.66 | 68.49 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000008718 retrocopies