Parental gene:

ENSDNOG00000007983

Aliases:None
Description:None
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_5728:59267..69174(-)


>ENSDNOG00000007983
ATGGCGCCACCCGTGAGGTACTGCATCCCGGGCGAACGTCTGTGTAACTTGGAGGAGGGCAGCCCGGGAAGCGGCACGTA
CACCCGGCACGGTTACATCTTTTCGTCGCTTGCCGGCTGCCTGACGAAGAGCAGCGAAAACGGCGCGCTTCCTGTGGTGT
CAGTGATGAGAGAGACAGAGTCCCAATTACTGCCAGATGTGGGGGCTATTGTAACCTGTAAGGTCTCTAGCATCAATTCG
CGCTTTGCCAAAGTACATATCTTATACGTGGGGTCCACACCACTTAAGAACTCCTTTCGAGGAACTATCCGCAAGGAAGA
TGTCCGAGCTACTGAAAAAGACAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTG
ACACACAGTCCAGCTACCTGCTGACCACCACTGAAAACGAGCAAGGAACGGTGGTGGCCCACAGTGAATCAGGTGTCCAG
ATGGTACCCATCAGCTGGTGTACCCATGTTAAAGAATTCCAGAAAGTGGCAAGGCAACCTGAATTCTTCCAGACCTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 6 .81 RPM
SRP012922_cerebellum 5 .91 RPM
SRP012922_heart 3 .25 RPM
SRP012922_kidney 4 .93 RPM
SRP012922_liver 3 .10 RPM
SRP012922_lung 7 .48 RPM
SRP012922_quadricep_muscle 3 .81 RPM
SRP012922_spleen 8 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006477 ortholog_one2many 1 retrogene
retro_chof_2075,
Erinaceus europaeus ENSEEUG00000005647 ortholog_one2many 3 retrogenes
retro_eeur_270, retro_eeur_438, retro_eeur_464,
Macropus eugenii ENSMEUG00000002246 ortholog_one2many 2 retrogenes
retro_meug_1799, retro_meug_951,
Myotis lucifugus ENSMLUG00000009228 ortholog_one2many 1 retrogene
retro_mluc_1563,
Mus musculus ENSMUSG00000034321 ortholog_one2many 1 retrogene
retro_mmus_691,
Oryctolagus cuniculus ENSOCUG00000011898 ortholog_many2many 1 retrogene
retro_ocun_173,
Otolemur garnettii ENSOGAG00000016259 ortholog_one2many 1 retrogene
retro_ogar_2496,
Pteropus vampyrus ENSPVAG00000003372 ortholog_one2many 1 retrogene
retro_pvam_686,
Rattus norvegicus ENSRNOG00000048708 ortholog_one2many 1 retrogene
retro_rnor_899,
Ictidomys tridecemlineatus ENSSTOG00000006615 ortholog_one2many 1 retrogene
retro_itri_1253,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_104 59.48 62.16
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Download FASTA sequences of all ENSDNOG00000007983 retrocopies