Parental gene:

PSMD4, ENSDNOG00000007446

Aliases:None
Description:proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 [Source:HGNC Symbol;Acc:9561]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_4736:4057..11535(+)


>ENSDNOG00000007446
ATGGTGTTGGAAAGCACTGTGGTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTGACTGTGAAGTCCTGACCACGCTGACCCCTGACACCGGCCGCATCCTCTCCAAGCTCCACACTGTCCAACCC
AAGGGCAAGATCACCTTCTGCACCGGCATCCGCGTGGCCCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGGTGAAACTGGCGAAACGCCTCAAGAAGG
AGAAAGTAAATGTTGACATTATCAATTTTGGGGAAGAGGAGGTGAACACAGAGAAGCTGACAGCCTTTGTAAACACACTG
AATGGCAAAGATGGAACTGGGTCTCATCTGGTGACAGTGCCTCCTGGGCCTAGCTTGGCGGATGCCCTCATCAGTTCTCC
GATTCTGGCTGGTGAAGGTGGTGCCATGCTGGGGCTTGGTGCCAGTGACTTTGAATTCGGAGTGGATCCCAGTGCTGATC
CCGAGCTGGCTTTGGCCCTTCGTGTTTCCATGGAAGAGCAGCGGCAGCGGCAGGAAGAGGAGGCACGGCGTGCAGCTGCA
GCCTCTGCTGCTGAGGCTGGGATTGCTACAGCTGGGACTGAAGGTGAAAGAGATTCAGATGATGCCCTGCTGAAGATGAC
CATCAGCCAGCAGGAGTTTGGTCGCACCGGGCTCCCTGACCTGAGCAGTATGACTGAAGAGGAGCAGATTGCTTATGCCA
TGCAGATGTCCCTGCAGGGAGCAGAGATTGGCCAGGCAGAATCAGCGGATATTGACGCCAGCTCAGCCATGGACACATCT
GAGCCAGCCAAGGAGGAGGATGATTATGATGTGATGCAGGATCCTGAGTTCCTTCAGAGTGTCCTAGAGAACCTTCCAGG
TGTGGATCCCAACAATGAGGCCATTCGAAATGCCATGGGCTCCCTGGCCTCCCAGGCCACCAAGGATAGCAAAAAGGACA
AGAAGGAGGAGGACAAGAAGTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 45 .12 RPM
SRP012922_cerebellum 51 .55 RPM
SRP012922_heart 46 .41 RPM
SRP012922_kidney 57 .22 RPM
SRP012922_liver 22 .60 RPM
SRP012922_lung 57 .73 RPM
SRP012922_quadricep_muscle 55 .73 RPM
SRP012922_spleen 51 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012565 ortholog_one2one 1 retrogene
retro_cfam_591,
Callithrix jacchus ENSCJAG00000007357 ortholog_one2one 1 retrogene
retro_cjac_2808,
Homo sapiens ENSG00000159352 ortholog_one2one 1 retrogene
retro_hsap_2531,
Nomascus leucogenys ENSNLEG00000010139 ortholog_one2one 1 retrogene
retro_nleu_1450,
Pongo abelii ENSPPYG00000000871 ortholog_one2one 1 retrogene
retro_pabe_1862,
Pan troglodytes ENSPTRG00000013893 ortholog_one2one 1 retrogene
retro_ptro_1474,
Sus scrofa ENSSSCG00000006628 ortholog_one2one 1 retrogene
retro_sscr_981,
Tupaia belangeri ENSTBEG00000016911 ortholog_one2one 1 retrogene
retro_tbel_238,
Tursiops truncatus ENSTTRG00000007019 ortholog_one2one 1 retrogene
retro_ttru_903,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1556 81.68 67.37
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Download FASTA sequences of all ENSDNOG00000007446 retrocopies