Parental gene: | C12orf49, ENSDNOG00000001294 |
| Aliases: | None |
| Description: | chromosome 12 open reading frame 49 [Source:HGNC Symbol;Acc:26128] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_1815:194964..201509(-) |
>ENSDNOG00000001294
GAGGAGAGGGCAGTGAGAGATCGGAATCTTCTCCAGGTTCAAGATCATGATCAGCCCATTCCCTGGAAAGTGCAGTTTAA
CCTGGGCAATAGCAGTCGACCAGGCAATCAGTGCCGTAACTCCATTCAAGGGAAGCATCTCATCACGGATGAACTAGGAT
ACGTTTGTGAAAGGAAGGATTTGCTGGTGAATGGCTGCTGTCATGTCCACGTCCCTAGCACAAAGCAATACTGCTGCGAT
GGCTGCTTGTCCAATGGCTGCTGCAGCGCCTATGAGTACTGTGTCTCCTGCTGCCTGCAGCCCAACAAGCAACTTCTCCT
GGAGCGCTTCCTCAACCGAGCAGCCATGGCATTCCAGAACCTCTTCATGGCAGTGGAAGATCATTTTGAATTGTGTTTGG
CTAAATGCAGGACCTCATCTCAGAGTGTGCAGCATGAGAACACCTATAGGGATCCCATAGCCAAGTATTGCTATGGCGAG
AGCCCTCCCGAGCTCTTCCCTGCGTGA
GAGGAGAGGGCAGTGAGAGATCGGAATCTTCTCCAGGTTCAAGATCATGATCAGCCCATTCCCTGGAAAGTGCAGTTTAA
CCTGGGCAATAGCAGTCGACCAGGCAATCAGTGCCGTAACTCCATTCAAGGGAAGCATCTCATCACGGATGAACTAGGAT
ACGTTTGTGAAAGGAAGGATTTGCTGGTGAATGGCTGCTGTCATGTCCACGTCCCTAGCACAAAGCAATACTGCTGCGAT
GGCTGCTTGTCCAATGGCTGCTGCAGCGCCTATGAGTACTGTGTCTCCTGCTGCCTGCAGCCCAACAAGCAACTTCTCCT
GGAGCGCTTCCTCAACCGAGCAGCCATGGCATTCCAGAACCTCTTCATGGCAGTGGAAGATCATTTTGAATTGTGTTTGG
CTAAATGCAGGACCTCATCTCAGAGTGTGCAGCATGAGAACACCTATAGGGATCCCATAGCCAAGTATTGCTATGGCGAG
AGCCCTCCCGAGCTCTTCCCTGCGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 2 .14 RPM |
| SRP012922_cerebellum | 3 .85 RPM |
| SRP012922_heart | 0 .00 RPM |
| SRP012922_kidney | 4 .11 RPM |
| SRP012922_liver | 2 .01 RPM |
| SRP012922_lung | 2 .60 RPM |
| SRP012922_quadricep_muscle | 0 .87 RPM |
| SRP012922_spleen | 2 .63 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000012481 | ortholog_one2one | 2 retrogenes | |
| Bos taurus | ENSBTAG00000047139 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000009570 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000016892 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000111412 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015690 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000011912 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000018247 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000005500 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_126 | 70.30 | 59.52 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_232 | 76.52 | 76.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1532 | 68.71 | 86.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_1609 | 70.00 | 64.88 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_1622 | 82.17 | 93.45 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_dnov_1739 | 82.17 | 93.45 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_dnov_2042 | 69.42 | 70.83 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_dnov_2185 | 69.82 | 98.81 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_dnov_2285 | 78.24 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000001294 retrocopies