Parental gene:

DCTN6, ENSCPOG00000011021

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_130:429531..456658(-)


>ENSCPOG00000011021
ATGGCGGAGAAGACTCAAAAGAGTGTGAAGATTGCTCCTGGAGCAGTTGTATGTGTAGAAAGTGAAATCAGAGGTGATGT
AACTATAGGACCGAGGACAGTGATCCACCCTAAAGCACGAATTATTGCAGAAGCTGGGCCGATAGTGATTGGTGAAGGTA
ACTTAATAGAAGAACAGGCCCTGATCATAAATGCTCATCCAGACAATATCACCCCTGACACTGAAGATCTGGAACCCAAA
CCCATGATCATTGGCACCAATAATGTGTTCGAAGTGGGCTGTTATTCCCAAGCCATGAAAATGGGAGATAATAATGTCAT
TGAGTCGAAAGCATACGTAGGCAGAAATGTAATACTGACAAGTGGCTGCATCATTGGGGCTTGTTGCAACCTAAACACTT
TTGAAGTCATCCCTGAAAACACAGTTATCTATGGTGCAGACTGTCTTCGCCGGGTACAGACTGAGCGGCCACAGCCCCAG
ACACTCCAGCTGGATTTCTTGATGAAAATCTTGCCAAATTACCACCACCTAAAGAAGACTACGAAAGGAAGCTCAACTCC
AGTTAAGAAC

Library Parental gene expression (RPM)
SRP017611_liver 9 .05 RPM
SRP017611_kidney 19 .79 RPM
SRP017611_brain 25 .94 RPM
SRP040447_lung 13 .47 RPM
SRP040447_skeletal_muscle 12 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001497 ortholog_one2one 1 retrogene
retro_amel_1860,
Canis familiaris ENSCAFG00000006518 ortholog_one2one 1 retrogene
retro_cfam_2154,
Choloepus hoffmanni ENSCHOG00000002554 ortholog_one2one 3 retrogenes
retro_chof_1387, retro_chof_390, retro_chof_71,
Echinops telfairi ENSETEG00000012307 ortholog_one2one 2 retrogenes
retro_etel_1571, retro_etel_1652,
Felis catus ENSFCAG00000000133 ortholog_one2many 1 retrogene
retro_fcat_113,
Homo sapiens ENSG00000104671 ortholog_one2one 1 retrogene
retro_hsap_1780,
Gorilla gorilla ENSGGOG00000013074 ortholog_one2one 1 retrogene
retro_ggor_2236,
Myotis lucifugus ENSMLUG00000028330 ortholog_one2one 2 retrogenes
retro_mluc_1616, retro_mluc_2026,
Macaca mulatta ENSMMUG00000013735 ortholog_one2one 1 retrogene
retro_mmul_1241,
Monodelphis domestica ENSMODG00000019010 ortholog_one2one 1 retrogene
retro_mdom_1260,
Nomascus leucogenys ENSNLEG00000011906 ortholog_one2one 2 retrogenes
retro_nleu_1311, retro_nleu_2969,
Oryctolagus cuniculus ENSOCUG00000010968 ortholog_one2one 1 retrogene
retro_ocun_917,
Ochotona princeps ENSOPRG00000005061 ortholog_one2many 1 retrogene
retro_opri_950,
Pan troglodytes ENSPTRG00000020134 ortholog_one2one 1 retrogene
retro_ptro_1191,
Tarsius syrichta ENSTSYG00000013306 ortholog_one2one 1 retrogene
retro_tsyr_893,
Tursiops truncatus ENSTTRG00000012439 ortholog_one2one 1 retrogene
retro_ttru_780,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_706 60.87 60.00
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2. retro_cpor_1437 60.81 74.74
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Download FASTA sequences of all ENSCPOG00000011021 retrocopies