Parental gene: | ABHD10, ENSCPOG00000005650 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_35:13628146..13639959(+) |
>ENSCPOG00000005650
GCCGCTGGGAAGATGGCGAGCGTGGGCCTGGCCGCTTGGCGGTCTTGTTTCATTGGAGGCCAGGCAACCGCTTCTTTTGG
CCACTACCATAACCTCAGCGCACCAACACTGAAGTCCCAGCGGGTGCCCTGGAGGTTCCCAGTTTGCAGACAAAAGACAT
CATTCTCTTTCCTTAATCGACCAGATCTTCCAAAACTGGCTTATAAGAGGCTAAACGGCAAAAGTCCAGGAGTTATCTTC
ATCCCTGGCTACATCTCTAACATGAATGGTACAAAAGCACTGGCGATTGAGGAATTTTGCAAATCTCTAGGGCATGCCTA
TATAAGGTTTGATTACTCAGGAGTTGGAAATTCAGAGGGTAACTTAGAAGAATGCACGGTGGGGAAATGGAGAAAAGATA
TTCTTTCTATAATTGATGATATAGCTGTAGGACCACAGATACTGGTTGGATCTAGCCTTGGCGGGTGGCTTATGCTTCAT
GCTGCAATTGCACGACCAGAAAAGGTCATGGCTCTTGTTGGTGTAGCTACAGCTGCAGATACCCTAGTGACCCGGTTTAA
TCAGCTTCCTGTTGAGGTAAAAAAAGAAGCAGAGCTGAAAGGCACGTGGACCCTGCCGTCAAAGTACCACGAAGACGGAG
TTCACCACATTCGGTACAGTTTCATCCAGGAAGCGGCGCACCACTGCCTGTTGCACAGCCCCATCCCTGTGAACTGCCCT
GTGAGACTGCTGCACGGCCTGAAGGATGACGTCGTCCCTTGGCACACGTCCATGCAGGTGGCTGACCGAGTGCTCAGCAC
AGACGTGGATGTCATCCTGCGGAAAGACAGTGACCACCGAATGAAGGAAAAGGCGGACTTACAGCTTCTTACTTACACTA
TCGACGATTTAATCGATAAGCTTTCAACTATAGTTAACTAG
GCCGCTGGGAAGATGGCGAGCGTGGGCCTGGCCGCTTGGCGGTCTTGTTTCATTGGAGGCCAGGCAACCGCTTCTTTTGG
CCACTACCATAACCTCAGCGCACCAACACTGAAGTCCCAGCGGGTGCCCTGGAGGTTCCCAGTTTGCAGACAAAAGACAT
CATTCTCTTTCCTTAATCGACCAGATCTTCCAAAACTGGCTTATAAGAGGCTAAACGGCAAAAGTCCAGGAGTTATCTTC
ATCCCTGGCTACATCTCTAACATGAATGGTACAAAAGCACTGGCGATTGAGGAATTTTGCAAATCTCTAGGGCATGCCTA
TATAAGGTTTGATTACTCAGGAGTTGGAAATTCAGAGGGTAACTTAGAAGAATGCACGGTGGGGAAATGGAGAAAAGATA
TTCTTTCTATAATTGATGATATAGCTGTAGGACCACAGATACTGGTTGGATCTAGCCTTGGCGGGTGGCTTATGCTTCAT
GCTGCAATTGCACGACCAGAAAAGGTCATGGCTCTTGTTGGTGTAGCTACAGCTGCAGATACCCTAGTGACCCGGTTTAA
TCAGCTTCCTGTTGAGGTAAAAAAAGAAGCAGAGCTGAAAGGCACGTGGACCCTGCCGTCAAAGTACCACGAAGACGGAG
TTCACCACATTCGGTACAGTTTCATCCAGGAAGCGGCGCACCACTGCCTGTTGCACAGCCCCATCCCTGTGAACTGCCCT
GTGAGACTGCTGCACGGCCTGAAGGATGACGTCGTCCCTTGGCACACGTCCATGCAGGTGGCTGACCGAGTGCTCAGCAC
AGACGTGGATGTCATCCTGCGGAAAGACAGTGACCACCGAATGAAGGAAAAGGCGGACTTACAGCTTCTTACTTACACTA
TCGACGATTTAATCGATAAGCTTTCAACTATAGTTAACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 27 .64 RPM |
| SRP017611_kidney | 17 .48 RPM |
| SRP017611_brain | 8 .51 RPM |
| SRP040447_lung | 5 .75 RPM |
| SRP040447_skeletal_muscle | 5 .22 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000020230 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000014818 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000029739 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000009517 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000016358 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1498 | 65.00 | 51.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000005650 retrocopies