Parental gene:

RBM3, ENSCPOG00000003553

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_132:1941516..1943315(+)


>ENSCPOG00000003553
ATGTCTTCTGAAGAAGGGAAGCTTTTCGTTGGCGGGCTCAACTTCAGTACCGACGAGCAGGCACTGGAAGACCACTTCAG
CAGCTTTGGGCCTATTTCTGAGGTGGTGGTTGTCAAGGACCGGGAAACTCAGCGATCCCGGGGTTTTGGCTTCATCACCT
TTACCAATCCAGAGCACGCCTCAGATGCAATGAGAGCTATGAATGGAGAGTCCCTGGATGGTCGCCAGATCCGTGTGGAC
CATGCAGGCAAATCTGCCCGGGGCACCAGAGGAGGGGGTGCTTTTGGGGCCCATGGACGTGGTCGCAGCTACTCTAGAGG
TGGTGGGGACCAGGGCTATGGGAGTGGCAGGTATGACAGTCGACCAGGGCGATCCAGAGACTTTAGTGGCAGAAGCCAGG
GTGGTTATGACCGCTACTCAGGAGGGAATTACAGAGACAGTTATGACAACTAA

Library Parental gene expression (RPM)
SRP017611_liver 14 .84 RPM
SRP017611_kidney 37 .58 RPM
SRP017611_brain 28 .87 RPM
SRP040447_lung 51 .07 RPM
SRP040447_skeletal_muscle 19 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000013718 ortholog_one2one 1 retrogene
retro_acar_197,
Bos taurus ENSBTAG00000025848 ortholog_one2one 1 retrogene
retro_btau_1144,
Canis familiaris ENSCAFG00000015485 possible_ortholog 2 retrogenes
retro_cfam_1475, retro_cfam_259,
Cavia porcellus ENSCPOG00000006313 within_species_paralog 1 retrogene
retro_cpor_162,
Cavia porcellus ENSCPOG00000012164 within_species_paralog 1 retrogene
retro_cpor_778,
Dasypus novemcinctus ENSDNOG00000010420 ortholog_one2one 16 retrogenes
retro_dnov_1343, retro_dnov_1380, retro_dnov_1463, retro_dnov_151, retro_dnov_1718, retro_dnov_180, retro_dnov_2034, retro_dnov_2076, retro_dnov_212, retro_dnov_213, retro_dnov_2217, retro_dnov_2367, retro_dnov_2581, retro_dnov_733, retro_dnov_778, retro_dnov_974,
Gadus morhua ENSGMOG00000012137 ortholog_many2many 1 retrogene
retro_gmor_4,
Loxodonta africana ENSLAFG00000007003 possible_ortholog 1 retrogene
retro_lafr_1091,
Pongo abelii ENSPPYG00000020314 possible_ortholog 1 retrogene
retro_pabe_40,
Sus scrofa ENSSSCG00000021591 possible_ortholog 1 retrogene
retro_sscr_842,
Ictidomys tridecemlineatus ENSSTOG00000027493 possible_ortholog 1 retrogene
retro_itri_142,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_950 55.93 76.67
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Download FASTA sequences of all ENSCPOG00000003553 retrocopies