Parental gene: | STX8, ENSCPOG00000002114 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_61:8139594..8413038(-) |
>ENSCPOG00000002114
ATGGCACCGGACCCCTGGTTCTCCACGTACGATTCCACCTGTCAAATTGCCCAAGACATTGCTGAGAAAATTCAACAACG
AAATCAGTATGAAAGAAGAGGCGAAAAGACACCCAAGCTCACCGTGGCCATCCGGACTTCGCTGCAGAACCTGAAGGAGA
AGATCGCCCTTCTGAAGGATTTACTGCTGAGAGCGGTGTCAACACATCAGATAACACAGCTGGAAGGCGACCGAAGACAG
AACCTCCTGGACGACCTCGTAACGCGAGAGAGACTGCTCCTGGCGTCCTTCAAGAACGAGGGTGCGGAGCCAGATCTAAT
CAGGTCCAGCCTGATGAGGGAGGAGGCTAAGCGAGGAGCCCCCAACCCTTGGCTCTTTGAGGAGCCGGAGGAGACCAGAG
GCTTGGGATTTGATGAACTCCGGCAGCAGCAGCAGAAAATCATCCAAGAACAGGATGCAGGCCTTGATGCCCTTTCCTCT
ATCATAAGTCGCCAAAAACAAATGGGACAGGAAATCGGAAATGAGTTGGATGAACAAAACGAGATCATTGATGACCTCGC
CAATCTCGTGGAGAACACAGATGAAAAGCTTCGCACCGAAACGAGGCGTGTGACCTTGGTGGACAGAAAGTCTACGTCAT
GTGGGATGATAATGGTGATTTTATTGCTGCTCGTGGCTATTGTGGTCGTTGCAGTCTGGCCAACCAAC
ATGGCACCGGACCCCTGGTTCTCCACGTACGATTCCACCTGTCAAATTGCCCAAGACATTGCTGAGAAAATTCAACAACG
AAATCAGTATGAAAGAAGAGGCGAAAAGACACCCAAGCTCACCGTGGCCATCCGGACTTCGCTGCAGAACCTGAAGGAGA
AGATCGCCCTTCTGAAGGATTTACTGCTGAGAGCGGTGTCAACACATCAGATAACACAGCTGGAAGGCGACCGAAGACAG
AACCTCCTGGACGACCTCGTAACGCGAGAGAGACTGCTCCTGGCGTCCTTCAAGAACGAGGGTGCGGAGCCAGATCTAAT
CAGGTCCAGCCTGATGAGGGAGGAGGCTAAGCGAGGAGCCCCCAACCCTTGGCTCTTTGAGGAGCCGGAGGAGACCAGAG
GCTTGGGATTTGATGAACTCCGGCAGCAGCAGCAGAAAATCATCCAAGAACAGGATGCAGGCCTTGATGCCCTTTCCTCT
ATCATAAGTCGCCAAAAACAAATGGGACAGGAAATCGGAAATGAGTTGGATGAACAAAACGAGATCATTGATGACCTCGC
CAATCTCGTGGAGAACACAGATGAAAAGCTTCGCACCGAAACGAGGCGTGTGACCTTGGTGGACAGAAAGTCTACGTCAT
GTGGGATGATAATGGTGATTTTATTGCTGCTCGTGGCTATTGTGGTCGTTGCAGTCTGGCCAACCAAC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 8 .23 RPM |
| SRP017611_kidney | 17 .90 RPM |
| SRP017611_brain | 7 .82 RPM |
| SRP040447_lung | 18 .69 RPM |
| SRP040447_skeletal_muscle | 10 .16 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000002045 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000017413 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000008276 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000008612 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000007815 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000001001 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000003849 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000010795 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1034 | 79.66 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000002114 retrocopies