Parental gene:

STX8, ENSCAFG00000017413

Aliases:None
Description:syntaxin 8 [Source:HGNC Symbol;Acc:11443]
Organism:Dog (Canis familiaris)
Coordinates:5:33834270..34087011(-)


>ENSCAFG00000017413
CCATCGTTCTCCACATACGACTCTACCTGCCAAATTGCACAAGAGATTGCCGAGAAAATCCAACAGCAAAATCAGTATGA
AAGAAATGGTGAAAATACAATCAGGCTTACCGTGACAATCAGAACTTTGTTGCAGAATCTGAAGGAAAAGATCGCCCTTT
TGAAGGACTTATTGCTAAATGCTGTGTCAACACATCAGATCACACAGCTTGAAGGAGACCGAAGACAGAACCTCCTGGAT
GAACTCGTAACTCGAGAGAGACTGCTTGTGGCATCTTTTAAGAACGAGGGTGCAGAACCGGATCTCATCAGGTCCAGCCT
GATGACTGGAGGGGCTAAGCGAGGAGTTGCCAACCCTTGGCTCTTTGAGGAGCCAGAGGAGACCAGAGGTTTGGGTTTTG
ATGAAATCCGGCAACAGCAGCAGAAGATTATCCAAGAACAGGATGCAGGCCTGGATGCCCTGTCCTCTATCATAAGTCGC
CAGAAACAGATGGGGAAGGAAATTGGGAACGAACTGGATGAACAAAAT

Library Parental gene expression (RPM)
SRP017611_brain 27 .15 RPM
SRP017611_kidney 42 .40 RPM
SRP017611_liver 8 .92 RPM
SRP012049_cerebellum 28 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002045 ortholog_one2one 1 retrogene
retro_amel_911,
Cavia porcellus ENSCPOG00000002114 ortholog_one2one 1 retrogene
retro_cpor_1034,
Felis catus ENSFCAG00000008276 ortholog_one2one 1 retrogene
retro_fcat_634,
Myotis lucifugus ENSMLUG00000008612 ortholog_one2one 1 retrogene
retro_mluc_2329,
Mustela putorius furo ENSMPUG00000007815 ortholog_one2one 2 retrogenes
retro_mputfur_975, retro_mputfur_996,
Pteropus vampyrus ENSPVAG00000001001 ortholog_one2one 1 retrogene
retro_pvam_147,
Rattus norvegicus ENSRNOG00000003849 ortholog_one2one 2 retrogenes
retro_rnor_2422, retro_rnor_2500,
Tarsius syrichta ENSTSYG00000010795 ortholog_one2one 1 retrogene
retro_tsyr_1906,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1959 93.22 100.00
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Download FASTA sequences of all ENSCAFG00000017413 retrocopies