Parental gene: | DYNLRB1, ENSCJAG00000018199 |
| Aliases: | None |
| Description: | dynein, light chain, roadblock-type 1 [Source:HGNC Symbol;Acc:15468] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:2736864..2768761(-) |
>ENSCJAG00000018199
ATGGCAGAGGTGGAGGAGACACTGAAGCGACTTCAGAGCCAGAAGGGAGTGCAGGGAATCATCGTGGTGAACACAGAAGG
CATTCCCATCAAGAGCACCATGGACAACCCCACCACCACCCAGTATGCCAGCCTCATGCACAGCTTCATCCTGAAGGCAC
GGAGCACCGTGCGTGAAATCGACCCCCAGAACGATCTCACCTTCCTTCGAATTCGCTCCAAGAAAAATGAGATTATGGTT
GCACCAGGTAAGGGGTCTTCTGCCTCCCTATGTAGGAACAGACCTCACGGCACATGCTCTGCTCATCAGGAGGCCTGGCA
CAGTGGTGTCTCCAGAGGATCCAAGCAGGGCCCAAGGAGTTGA
ATGGCAGAGGTGGAGGAGACACTGAAGCGACTTCAGAGCCAGAAGGGAGTGCAGGGAATCATCGTGGTGAACACAGAAGG
CATTCCCATCAAGAGCACCATGGACAACCCCACCACCACCCAGTATGCCAGCCTCATGCACAGCTTCATCCTGAAGGCAC
GGAGCACCGTGCGTGAAATCGACCCCCAGAACGATCTCACCTTCCTTCGAATTCGCTCCAAGAAAAATGAGATTATGGTT
GCACCAGGTAAGGGGTCTTCTGCCTCCCTATGTAGGAACAGACCTCACGGCACATGCTCTGCTCATCAGGAGGCCTGGCA
CAGTGGTGTCTCCAGAGGATCCAAGCAGGGCCCAAGGAGTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 8 .70 RPM |
| SRP051959_skeletal_muscle | 4 .02 RPM |
| SRP051959_lymph_node | 9 .89 RPM |
| SRP051959_lung | 8 .85 RPM |
| SRP051959_liver | 6 .41 RPM |
| SRP051959_kidney | 10 .14 RPM |
| SRP051959_heart | 6 .75 RPM |
| SRP051959_colon | 7 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000009179 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000007547 | ortholog_one2one | 6 retrogenes | |
| Equus caballus | ENSECAG00000008404 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000018637 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000002304 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000125971 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000023900 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000029820 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000003253 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000004820 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000031253 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010082 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000021027 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000016802 | ortholog_one2many | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000004714 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000010937 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013416 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000025715 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000014820 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_882 | 98.96 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1010 | 97.92 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_1172 | 52.87 | 89.58 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_1274 | 91.75 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cjac_1539 | 90.43 | 97.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_cjac_2071 | 100.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_cjac_2902 | 93.75 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_cjac_3185 | 81.44 | 98.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_cjac_3215 | 91.67 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_cjac_3260 | 97.92 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000018199 retrocopies