Parental gene:

POLE3, ENSCJAG00000017917

Aliases:None
Description:polymerase (DNA directed), epsilon 3, accessory subunit [Source:HGNC Symbol;Acc:13546]
Organism:Marmoset (Callithrix jacchus)
Coordinates:1:156851714..156855099(-)


>ENSCJAG00000017917
ATGGCGGAAAGGCCAGAAGACCTAAACCTGCCCAACGCTGTCATCACCAGGATCATCAAGGAGGCGCTCCCGGACGGTGT
TAACATCTCTAAGGAGGCCCGGAGCGCCATCTCTCGCGCCGCCAGCGTCTTCGTGCTGTACGCCACATCCTGTGCGAACA
ACTTTGCAATGAAAGGAAAGCGCAAGACGCTGAATGCCACCGATGTGCTGTCAGCCATGGAAGAGATGGAGTTCCAGCGG
TTCGTTACCCCATTAAAAGAAGCCCTAGAAGCATATAGGCGGGAGCAGAAAGGCAAGAAGGAGGCCTCAGAGCAAAAGAA
GAAAGACAAAGACAAAAAAACAGACTCTGAAGATCAAGACAAGAGCCGGGATGAGGACAATGATGAAGACGAAGAAAGGC
TGGAAGAAGAAGAACAGAATGAAGAGGAGGAAGTAGACAACTGA

Library Parental gene expression (RPM)
SRP051959_spleen 19 .73 RPM
SRP051959_skeletal_muscle 12 .47 RPM
SRP051959_lymph_node 15 .07 RPM
SRP051959_lung 15 .32 RPM
SRP051959_liver 11 .85 RPM
SRP051959_kidney 17 .44 RPM
SRP051959_heart 11 .47 RPM
SRP051959_colon 17 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000014610 within_species_paralog 1 retrogene
retro_cjac_1133,
Cavia porcellus ENSCPOG00000000313 ortholog_one2one 1 retrogene
retro_cpor_355,
Dipodomys ordii ENSDORG00000003073 ortholog_one2one 2 retrogenes
retro_dord_526, retro_dord_652,
Monodelphis domestica ENSMODG00000004358 ortholog_one2one 3 retrogenes
retro_mdom_1680, retro_mdom_1920, retro_mdom_647,
Mus musculus ENSMUSG00000028394 ortholog_one2many 2 retrogenes
retro_mmus_124, retro_mmus_555,
Pteropus vampyrus ENSPVAG00000004717 ortholog_one2one 1 retrogene
retro_pvam_302,
Rattus norvegicus ENSRNOG00000015392 ortholog_one2many 1 retrogene
retro_rnor_55,
Ictidomys tridecemlineatus ENSSTOG00000027365 ortholog_one2one 1 retrogene
retro_itri_866,
Tupaia belangeri ENSTBEG00000005211 ortholog_one2one 1 retrogene
retro_tbel_4052,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_4121 66.23 51.70
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Download FASTA sequences of all ENSCJAG00000017917 retrocopies