Parental gene:

ENSCJAG00000014547

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:11:54714870..54732218(+)


>ENSCJAG00000014547
ATGAGTCGTCGCCGGGCTTGGCGGTTCTTGCTTTTCCAAGGCAGCGGAGATCGCTGGGTTTCAAGCCCCCGCGGGCATTT
CTCGCCGGCCCTGCGGAGAGGCTTCTTCACTACCACAACCAAAGAGGGATATGATAGGCGTCCAGTGGACATAACTCCTT
TAGAACAAAGGAAATTAACTTTTGATACCCATGCATTGGTTCAGGACTTGGAAACTCATGGATTTGACAAAACACAAGCA
GAAACAATTGTATCAGCATTAACTACGTTATCAAATGTCAGCCTGGATACTATCTATAAAGAGATGGTCACTCAAGCTCA
ACAGGAAATAACAGTACAACAGCTAATGGCTCATTTGGACTCTATCAGGAAAGACATGGTCATCCTAGAGAAAAGTGAAT
TCGCAAATCTGAGAGCTGAGAATGAGAAAATGAAAATTGAACTAGACCAAGTTAAGCAACAACTAATGCATGAAACCAGT
CGAATCAGAGCAGATAATAAACTGGATATCAACCTAGAAAGGAGCAGAGTAACAGATATGTTTACAGATCAAGAAAAGCA
ACTTATGGAAGCAACTACAGAATTTACAAAAAAAGATACCCAAACCAAAAGTATTATTTCAGAGACCAGTAATAAAATTG
ATGCTGAAATTGCTTCCTTAAAAACACTGATGGAGTCTAACAAACTTGAGACCATTCGTTATCTTGCAGCCTCAGTGTTT
ACTTGCCTGGCAATAGCATTGGGATTTTATAGATTCTGGAAGTAG

Library Parental gene expression (RPM)
SRP051959_spleen 6 .11 RPM
SRP051959_skeletal_muscle 5 .39 RPM
SRP051959_lymph_node 5 .00 RPM
SRP051959_lung 6 .28 RPM
SRP051959_liver 5 .52 RPM
SRP051959_kidney 6 .74 RPM
SRP051959_heart 6 .52 RPM
SRP051959_colon 4 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010541 ortholog_one2many 2 retrogenes
retro_chof_1396, retro_chof_780,
Callithrix jacchus ENSCJAG00000016050 within_species_paralog 1 retrogene
retro_cjac_2522,
Homo sapiens ENSG00000137500 ortholog_one2many 1 retrogene
retro_hsap_3050,
Macaca mulatta ENSMMUG00000020154 ortholog_one2many 2 retrogenes
retro_mmul_1880, retro_mmul_773,
Nomascus leucogenys ENSNLEG00000016478 ortholog_one2many 1 retrogene
retro_nleu_1644,
Ochotona princeps ENSOPRG00000004144 ortholog_one2many 2 retrogenes
retro_opri_197, retro_opri_682,
Pongo abelii ENSPPYG00000003736 ortholog_one2many 1 retrogene
retro_pabe_2525,
Pan troglodytes ENSPTRG00000004129 ortholog_one2many 1 retrogene
retro_ptro_1990,
Pteropus vampyrus ENSPVAG00000005459 ortholog_one2many 1 retrogene
retro_pvam_614,
Rattus norvegicus ENSRNOG00000009462 ortholog_one2many 1 retrogene
retro_rnor_868,
Tupaia belangeri ENSTBEG00000014665 ortholog_one2many 2 retrogenes
retro_tbel_3436, retro_tbel_4221,
Tarsius syrichta ENSTSYG00000011196 ortholog_one2many 1 retrogene
retro_tsyr_710,
Tursiops truncatus ENSTTRG00000003998 ortholog_one2many 1 retrogene
retro_ttru_445,
Vicugna pacos ENSVPAG00000007753 ortholog_one2many 1 retrogene
retro_vpac_366,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_219 98.03 100.00
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Download FASTA sequences of all ENSCJAG00000014547 retrocopies