Parental gene:

WDR5, ENSCJAG00000010123

Aliases:None
Description:WD repeat domain 5 [Source:HGNC Symbol;Acc:12757]
Organism:Marmoset (Callithrix jacchus)
Coordinates:1:178234469..178258299(+)


>ENSCJAG00000010123
ATGGCAACGGAGGAGAAGAAGCCTGAGACTGAGGCCGCCAGAGCACAGCCGACCCCTTCGTCTTCTGCCACTCAGAGCAA
GCCTACACCCGTGAAGCCAAACTATGCTCTCAAGTTTACACTTGCTGGCCATACCAAAGCGGTGTCCTCAGTGAAATTCA
GCCCGAATGGAGAGTGGCTGGCGAGTTCATCTGCTGACAAACTCATTAAAATTTGGGGCGCATATGATGGGAAATTTGAG
AAAACCATATCTGGTCACAAGCTGGGAATATCCGATGTAGCCTGGTCGTCAGATTCTAACCTTCTTGTTTCCGCCTCAGA
TGACAAAACCCTGAAGATATGGGACGTGAGCTCGGGAAAGTGTCTAAAAACCCTGAAGGGACACAGTAATTATGTCTTTT
GCTGTAACTTCAATCCCCAGTCCAACCTTATTGTCTCAGGATCCTTTGATGAAAGTGTGAGGATATGGGATGTGAAAACA
GGGAAGTGCCTCAAGACTTTGCCTGCTCACTCGGATCCAGTCTCGGCTGTTCATTTTAATCGTGATGGATCCTTGATAGT
TTCAAGTAGCTATGATGGTCTCTGTCGAATCTGGGACACCGCCTCTGGCCAGTGCCTGAAGACACTCATCGATGATGACA
ACCCCCCAGTGTCTTTTGTGAAGTTCTCCCCGAACGGCAAATACATCCTGGCGGCCACGCTGGACAACACTCTGAAGCTC
TGGGACTACAGCAAGGGGAAGTGCCTGAAGACATACACTGGCCACAAGAATGAGAAATACTGCATATTTGCCAATTTCTC
TGTTACTGGCGGGAAGTGGATTGTGTCTGGCTCTGAGGATAACCTTGTTTACATCTGGAACCTTCAGACGAAAGAGATTG
TACAGAAATTACAAGGCCACACAGATGTTGTGATTTCAACAGCTTGTCACCCAACAGAAAATATCATTGCCTCTGCTGCG
CTAGAAAATGACAAAACAATTAAACTGTGGAAGAGTGACTGCTAA

Library Parental gene expression (RPM)
SRP051959_spleen 10 .06 RPM
SRP051959_skeletal_muscle 9 .37 RPM
SRP051959_lymph_node 9 .68 RPM
SRP051959_lung 11 .35 RPM
SRP051959_liver 6 .80 RPM
SRP051959_kidney 10 .85 RPM
SRP051959_heart 11 .09 RPM
SRP051959_colon 5 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011179 ortholog_one2one 1 retrogene
retro_amel_29,
Bos taurus ENSBTAG00000047031 ortholog_one2one 1 retrogene
retro_btau_299,
Canis familiaris ENSCAFG00000019830 ortholog_one2one 1 retrogene
retro_cfam_128,
Callithrix jacchus ENSCJAG00000005272 within_species_paralog 1 retrogene
retro_cjac_3664,
Cavia porcellus ENSCPOG00000014790 ortholog_one2one 1 retrogene
retro_cpor_12,
Dipodomys ordii ENSDORG00000015010 ortholog_one2one 1 retrogene
retro_dord_7,
Equus caballus ENSECAG00000017389 ortholog_one2one 1 retrogene
retro_ecab_82,
Echinops telfairi ENSETEG00000015731 ortholog_one2one 1 retrogene
retro_etel_15,
Felis catus ENSFCAG00000005712 ortholog_one2one 1 retrogene
retro_fcat_119,
Homo sapiens ENSG00000196363 ortholog_one2one 1 retrogene
retro_hsap_11,
Gorilla gorilla ENSGGOG00000004997 ortholog_one2one 2 retrogenes
retro_ggor_171, retro_ggor_2023,
Loxodonta africana ENSLAFG00000011192 ortholog_one2one 1 retrogene
retro_lafr_55,
Microcebus murinus ENSMICG00000008085 ortholog_one2one 1 retrogene
retro_mmur_34,
Myotis lucifugus ENSMLUG00000002236 ortholog_one2one 1 retrogene
retro_mluc_11,
Macaca mulatta ENSMMUG00000014159 ortholog_one2many 1 retrogene
retro_mmul_190,
Mustela putorius furo ENSMPUG00000012184 ortholog_one2one 1 retrogene
retro_mputfur_2,
Mus musculus ENSMUSG00000026917 ortholog_one2one 1 retrogene
retro_mmus_132,
Nomascus leucogenys ENSNLEG00000013472 ortholog_one2one 1 retrogene
retro_nleu_63,
Otolemur garnettii ENSOGAG00000008960 ortholog_one2one 1 retrogene
retro_ogar_86,
Procavia capensis ENSPCAG00000013476 ortholog_one2one 1 retrogene
retro_pcap_43,
Pan troglodytes ENSPTRG00000023653 ortholog_one2one 2 retrogenes
retro_ptro_18, retro_ptro_1975,
Pteropus vampyrus ENSPVAG00000001666 ortholog_one2one 1 retrogene
retro_pvam_112,
Rattus norvegicus ENSRNOG00000008212 ortholog_one2one 1 retrogene
retro_rnor_258,
Sus scrofa ENSSSCG00000024912 ortholog_one2one 1 retrogene
retro_sscr_1,
Ictidomys tridecemlineatus ENSSTOG00000015899 ortholog_one2one 1 retrogene
retro_itri_117,
Drosophila melanogaster FBgn0040066 ortholog_one2many 1 retrogene
retro_dmel_69,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1 85.23 97.31
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Download FASTA sequences of all ENSCJAG00000010123 retrocopies