Parental gene:

BT.39594, ENSBTAG00000047031

Aliases:None
Description:WD repeat-containing protein 5 [Source:RefSeq peptide;Acc:NP_001098945]
Organism:Cow (Bos taurus)
Coordinates:11:104929236..104939742(+)


>ENSBTAG00000047031
CAGCCCACACCGGTGAAACCAAACTATGCTCTTAAATTCACCCTGGCCGGCCACACGAAAGCTGTGTCCTCTGTGAAGTT
CAGCCCCAACGGGGAGTGGCTGGCGAGTTCGTCTGCAGATAAACTCATTAAGATTTGGGGAGCATATGATGGGAAATTTG
AGAAAACCATCTCTGGTCACAAGCTGGGCATATCCGACGTGGCCTGGTCGTCAGATTCTAACCTCCTTGTTTCTGCCTCA
GATGACAAAACCCTGAAGATCTGGGACGTGAGCTCGGGAAAGTGTCTGAAAACCCTGAAGGGACACAGCAATTACGTCTT
TTGCTGTAACTTCAACCCCCAGTCCAACCTCATTGTCTCGGGCTCCTTTGACGAGAGCGTGCGCATATGGGATGTGAAGA
CAGGGAAGTGCCTCAAGACCTTGCCGGCCCACTCAGATCCCGTCTCGGCCGTTCACTTTAACCGAGACGGATCCCTGATA
GTTTCCAGTAGTTACGACGGTCTCTGCCGCATCTGGGACACCGCCTCGGGCCAGTGCCTGAAGACGCTCATCGATGACGA
CAACCCCCCCGTGTCCTTCGTGAAGTTCTCTCCGAACGGCAAGTACATCCTGGCCGCCACCTTGGACAACACGCTGAAGC
TCTGGGACTACAGCAAAGGCAAGTGCCTGAAGACGTACACGGGCCACAAGAACGAGAAGTACTGCATATTCGCCAACTTC
TCCGTCACCGGGGGGAAGTGGATCGTGTCGGGCTCGGAGGACAACCTGGTCTACATCTGGAACCTGCAGACCAAGGAGAT
CGTGCAGAAGCTTCAGGGCCACACAGACGTCGTCATCTCGACGGCGTGCCACCCGACGGAGAACATCATCGCCTCGGCCG
CCCTGGAGAACGACAAGACCATCAAGCTCTGGAAGAGCGACTGCTAG

Library Parental gene expression (RPM)
SRP017611_brain 12 .70 RPM
SRP017611_kidney 16 .24 RPM
SRP017611_liver 13 .67 RPM
ERP005899_muscle 16 .58 RPM
ERP005899_liver 3 .03 RPM
SRP030211_testis 61 .59 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011179 ortholog_one2one 1 retrogene
retro_amel_29,
Bos taurus ENSBTAG00000004571 other_paralog 1 retrogene
retro_btau_1341,
Canis familiaris ENSCAFG00000019830 ortholog_one2one 1 retrogene
retro_cfam_128,
Callithrix jacchus ENSCJAG00000010123 ortholog_one2one 1 retrogene
retro_cjac_1,
Cavia porcellus ENSCPOG00000014790 ortholog_one2one 1 retrogene
retro_cpor_12,
Dipodomys ordii ENSDORG00000015010 ortholog_one2one 1 retrogene
retro_dord_7,
Equus caballus ENSECAG00000017389 ortholog_one2one 1 retrogene
retro_ecab_82,
Echinops telfairi ENSETEG00000015731 ortholog_one2one 1 retrogene
retro_etel_15,
Felis catus ENSFCAG00000005712 ortholog_one2one 1 retrogene
retro_fcat_119,
Homo sapiens ENSG00000196363 ortholog_one2one 1 retrogene
retro_hsap_11,
Gorilla gorilla ENSGGOG00000004997 ortholog_one2one 2 retrogenes
retro_ggor_171, retro_ggor_2023,
Loxodonta africana ENSLAFG00000011192 ortholog_one2one 1 retrogene
retro_lafr_55,
Microcebus murinus ENSMICG00000008085 ortholog_one2one 1 retrogene
retro_mmur_34,
Myotis lucifugus ENSMLUG00000002236 ortholog_one2one 1 retrogene
retro_mluc_11,
Macaca mulatta ENSMMUG00000014159 ortholog_one2many 1 retrogene
retro_mmul_190,
Mustela putorius furo ENSMPUG00000012184 ortholog_one2one 1 retrogene
retro_mputfur_2,
Mus musculus ENSMUSG00000026917 ortholog_one2one 1 retrogene
retro_mmus_132,
Nomascus leucogenys ENSNLEG00000013472 ortholog_one2one 1 retrogene
retro_nleu_63,
Otolemur garnettii ENSOGAG00000008960 ortholog_one2one 1 retrogene
retro_ogar_86,
Procavia capensis ENSPCAG00000013476 ortholog_one2one 1 retrogene
retro_pcap_43,
Pan troglodytes ENSPTRG00000023653 ortholog_one2one 2 retrogenes
retro_ptro_18, retro_ptro_1975,
Pteropus vampyrus ENSPVAG00000001666 ortholog_one2one 1 retrogene
retro_pvam_112,
Rattus norvegicus ENSRNOG00000008212 ortholog_one2one 1 retrogene
retro_rnor_258,
Sus scrofa ENSSSCG00000024912 ortholog_one2one 1 retrogene
retro_sscr_1,
Ictidomys tridecemlineatus ENSSTOG00000015899 ortholog_one2one 1 retrogene
retro_itri_117,
Drosophila melanogaster FBgn0040066 ortholog_one2one 1 retrogene
retro_dmel_69,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_299 87.91 99.35
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Download FASTA sequences of all ENSBTAG00000047031 retrocopies