Parental gene:

WRB, ENSCJAG00000005714

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:21:43323714..43356323(+)


>ENSCJAG00000005714
ATGAGCTCAGCTGCGGCGGACCACTGGGCGTGGTTGTTGGTGCTCAGTTTTGTGTTTGGGTGCAATGTTCTTAGGATCCT
CCTCCCGTCCTTCTCATCCTTCATGTCCAGGATGCTGCAGAAGGACGCCGAGCAGGAGTCCCAGATGAGAGCAGAGATCC
AGGACATGAAGCAGGAGCTCTCCACGGTCAACATGATGGACGAGTTTGCCAGATACGCCAGGCTGGAAAGAAAGATCAAC
AAGATGACGGATAAGCTCAAAACCCACGTGAAAGCTCGGACAGCTCAATTAGCCAAGATAAAATGGGTGATAAGTGTGGC
TTTCTACGTACTGCAGGCTGCCCTGATGATCTCACTCATTTGGAAGTACTATTCTGTTCCTGTGGCCGTTGTGCCGAGTA
AATGGATAACCCCTCTAGACCGCCTGGTAGCCTTCCCTACTAGAGTAGCAGGTGGTGTTGGAATTACCTGTTGGATTTTA
GTCTGTAACAAAGTTGTGGCTATTGTGCTTCATCCGTTCAGCTGA

Library Parental gene expression (RPM)
SRP051959_spleen 6 .20 RPM
SRP051959_skeletal_muscle 6 .75 RPM
SRP051959_lymph_node 5 .11 RPM
SRP051959_lung 8 .49 RPM
SRP051959_liver 16 .07 RPM
SRP051959_kidney 23 .78 RPM
SRP051959_heart 10 .91 RPM
SRP051959_colon 4 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000024987 ortholog_one2many 1 retrogene
retro_dnov_1496,
Homo sapiens ENSG00000182093 ortholog_one2one 1 retrogene
retro_hsap_3080,
Gorilla gorilla ENSGGOG00000013144 ortholog_one2one 1 retrogene
retro_ggor_2116,
Microcebus murinus ENSMICG00000015808 ortholog_one2one 1 retrogene
retro_mmur_1275,
Macaca mulatta ENSMMUG00000020654 ortholog_one2one 2 retrogenes
retro_mmul_1966, retro_mmul_853,
Mus musculus ENSMUSG00000023147 ortholog_one2one 1 retrogene
retro_mmus_1452,
Nomascus leucogenys ENSNLEG00000013146 ortholog_one2one 1 retrogene
retro_nleu_2014,
Otolemur garnettii ENSOGAG00000026761 ortholog_one2one 1 retrogene
retro_ogar_2691,
Pongo abelii ENSPPYG00000011427 ortholog_one2one 1 retrogene
retro_pabe_2552,
Pan troglodytes ENSPTRG00000013915 ortholog_one2one 1 retrogene
retro_ptro_2078,
Ictidomys tridecemlineatus ENSSTOG00000012736 ortholog_one2many 1 retrogene
retro_itri_1744,
Tursiops truncatus ENSTTRG00000015373 ortholog_one2one 1 retrogene
retro_ttru_1711,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2153 67.27 60.92
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2. retro_cjac_3208 84.00 100.00
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Download FASTA sequences of all ENSCJAG00000005714 retrocopies