Parental gene: | AP4S1, ENSCHOG00000013301 |
| Aliases: | None |
| Description: | adaptor-related protein complex 4, sigma 1 subunit [Source:HGNC Symbol;Acc:575] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_1256:7872..18247(+) |
>ENSCHOG00000013301
ATGATAAAGTTTTTCCTCATGGTGAATAAACAAGGGCAGACCCGACTTTCTAAGTACTATGAACACATGGAGATTTACAA
GCGGACACTTCTGGAAACCGAAGTCATAAAGAGCTGTCTCTCTCGATCCAGTGAACAATGCTCTTTCATTGAATATAAGG
ATTTTAAGCTGATATATCGTCAGTATGCAGCGCTCTTCATTGTGGTTGGAGTTAATGACACTGAGAATGAGATGGCTATT
TATGAATTCATTCATAATTTTGTGGAAGTTTTAGATGAGTACTTCAGCCGAGTGAGTGAATTGGATGTATCCTTTTTCAA
TTCCATGAGCCAAGTTTTTCATGGTACTGTGCAAATGCACTCCAGTACTGATGAGCTTATTGACTTTGGTTTTGTTCTGG
AAGCCCAGGAGGCCTGCTATTCTCCTGGCAATTCATTCAAAGCTGCCTCTACCACTTGCTAA
ATGATAAAGTTTTTCCTCATGGTGAATAAACAAGGGCAGACCCGACTTTCTAAGTACTATGAACACATGGAGATTTACAA
GCGGACACTTCTGGAAACCGAAGTCATAAAGAGCTGTCTCTCTCGATCCAGTGAACAATGCTCTTTCATTGAATATAAGG
ATTTTAAGCTGATATATCGTCAGTATGCAGCGCTCTTCATTGTGGTTGGAGTTAATGACACTGAGAATGAGATGGCTATT
TATGAATTCATTCATAATTTTGTGGAAGTTTTAGATGAGTACTTCAGCCGAGTGAGTGAATTGGATGTATCCTTTTTCAA
TTCCATGAGCCAAGTTTTTCATGGTACTGTGCAAATGCACTCCAGTACTGATGAGCTTATTGACTTTGGTTTTGTTCTGG
AAGCCCAGGAGGCCTGCTATTCTCCTGGCAATTCATTCAAAGCTGCCTCTACCACTTGCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000011939 | within_species_paralog | 5 retrogenes | |
| Dipodomys ordii | ENSDORG00000009468 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000013009 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000100478 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000003198 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003123 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000017579 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015901 | ortholog_one2one | 1 retrogene | |
| Ornithorhynchus anatinus | ENSOANG00000014031 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005723 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000006239 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000017161 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000010759 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_393 | 75.70 | 69.93 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_820 | 86.67 | 68.63 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_2345 | 98.08 | 67.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_2677 | 70.75 | 68.63 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000013301 retrocopies