Parental gene: | MDH1, ENSCHOG00000007281 |
| Aliases: | None |
| Description: | malate dehydrogenase 1, NAD (soluble) [Source:HGNC Symbol;Acc:6970] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | scaffold_22474:5574..13926(+) |
>ENSCHOG00000007281
GAATTGGAACCACTCAGAATCCTTGTGACTGGAGCAGCTGGTCAAATAGCATATTCACTGCTGTACAGTATTGGAAATGG
CTCTGTCTTTGGTAAAGACCAGCCTCTGATTCTTGTGCTGTTGGATATCACCCCCATGATGGGGGTCCTGGAAGGGGTCC
TTATGGAACTGCAAGACTGTGCACTTCCTCTCCTGAAAGATATCATCATAACAGATAAAGAAGACGTTGCCTTCAAAGAC
TTGGATGTAGCCATTCTCGTGGGTTCCATGCCAAGAAGGGATGGCATGGAGAGGAAAGATTTACTGAAAGCAAATGTGAA
AATTTTCAAAGTCCAAGGTGCAGCCTTGGAAAAATATGCCAAGAAGACAGTTAAGGTTGTTGTCGTAGGAAACCCAGCCA
ATACTAACTGCCTGACAGCATCAAAGTCTGCTCCATCCATCCCCAAGGAGAACTTCAGTTGCTTGACGCGTTTGGATCAA
AACCGAGCTAAATCTCAAATTGCTCTTAAACTTGGTGTGACTGCTGATAATGTAAAGAATGTCATCATCTGGGGAAACCA
TTCCTCAACTCAGTATCCAGATGTCAACCATGCCAAGGTGAAATTGCAAGGAAAGGAAGTTGGTGTTTATGAAGCTCTGA
AAGATGACAGCTGGCTTAAGGGAGACTTCATCACGACTGTGCAGCAGCGTGGCGCTGCCGTCATCAAGGCTCGGAAACTA
TCCAGCGCAATGTCTGCTGCAAAAGCCATCTGTGACCACCTCAGAGATCTCTGGTTTGGAACCCCAGAGGGGGAGTTTGT
GTCCATGGGTGTTATGTCTGACGGCAACTCCTATGGCATTCCTGATGATATGCTCTACTCATTCCCTGTTGTGATCAAGA
ATAAGACCTGGAAGTTTGTTGAAGGTCTCCCTATTAATGATTTCTCACGTGAGAAAATGGATCTTACTGCAAAGGAGCTA
GCAGAAGAAAAAGAAACTGCTTTTGAATTTCTTAGCTCTGCATGA
GAATTGGAACCACTCAGAATCCTTGTGACTGGAGCAGCTGGTCAAATAGCATATTCACTGCTGTACAGTATTGGAAATGG
CTCTGTCTTTGGTAAAGACCAGCCTCTGATTCTTGTGCTGTTGGATATCACCCCCATGATGGGGGTCCTGGAAGGGGTCC
TTATGGAACTGCAAGACTGTGCACTTCCTCTCCTGAAAGATATCATCATAACAGATAAAGAAGACGTTGCCTTCAAAGAC
TTGGATGTAGCCATTCTCGTGGGTTCCATGCCAAGAAGGGATGGCATGGAGAGGAAAGATTTACTGAAAGCAAATGTGAA
AATTTTCAAAGTCCAAGGTGCAGCCTTGGAAAAATATGCCAAGAAGACAGTTAAGGTTGTTGTCGTAGGAAACCCAGCCA
ATACTAACTGCCTGACAGCATCAAAGTCTGCTCCATCCATCCCCAAGGAGAACTTCAGTTGCTTGACGCGTTTGGATCAA
AACCGAGCTAAATCTCAAATTGCTCTTAAACTTGGTGTGACTGCTGATAATGTAAAGAATGTCATCATCTGGGGAAACCA
TTCCTCAACTCAGTATCCAGATGTCAACCATGCCAAGGTGAAATTGCAAGGAAAGGAAGTTGGTGTTTATGAAGCTCTGA
AAGATGACAGCTGGCTTAAGGGAGACTTCATCACGACTGTGCAGCAGCGTGGCGCTGCCGTCATCAAGGCTCGGAAACTA
TCCAGCGCAATGTCTGCTGCAAAAGCCATCTGTGACCACCTCAGAGATCTCTGGTTTGGAACCCCAGAGGGGGAGTTTGT
GTCCATGGGTGTTATGTCTGACGGCAACTCCTATGGCATTCCTGATGATATGCTCTACTCATTCCCTGTTGTGATCAAGA
ATAAGACCTGGAAGTTTGTTGAAGGTCTCCCTATTAATGATTTCTCACGTGAGAAAATGGATCTTACTGCAAAGGAGCTA
GCAGAAGAAAAAGAAACTGCTTTTGAATTTCTTAGCTCTGCATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000019295 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000007018 | ortholog_one2many | 4 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000013329 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000014641 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000007085 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000016504 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000006163 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000009823 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000014487 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000012373 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000011974 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000007690 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000025751 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000001215 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_90 | 70.65 | 59.28 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_1260 | 91.08 | 93.71 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_1513 | 92.07 | 67.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_1892 | 80.48 | 62.28 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_chof_2001 | 70.65 | 59.28 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000007281 retrocopies