Parental gene:

PLP2, ENSCAFG00000015798

Aliases:None
Description:proteolipid protein 2 (colonic epithelium-enriched) [Source:HGNC Symbol;Acc:9087]
Organism:Dog (Canis familiaris)
Coordinates:X:42273805..42275811(+)


>ENSCAFG00000015798
GTGGTGGGGCAGGAGGTCGTTAGCTATTTGGGCTGCTGGGGAGCCTGGGCCGCCCGCACCCCTCAAATTCTCCTGTCATT
CTTCCAGATACTGTGCCTGGTGATTCTGATCTGCTTCAGTGCCTCCACACCAGGATACTCCTCCCTGTCAGTGGTGGAGA
TGATCCTTGCTGCTATCTTCTTTGTCATCTACATGTGTGACCTGCACACCAAGATACAGATCATCAACTGGCCTTGGAGT
GATTTCTTCCGAACCCTCATAGCAGCCATCCTCTACCTGATCACCTCCATCGTTGTCCTTGTTGAAGGAGGAAACCACTC
CAAAATCATCGCGGGGGTACTGGGCCTAATCGCTACAAGCCTCTTTGGCTATGATGCTTATATCACCTTCCCCTTGCGGC
AGCAAAGACATACAGCAGCCCCTACTGATCCTGCAGATGGCCCGGTGTAG

Library Parental gene expression (RPM)
SRP017611_brain 1 .98 RPM
SRP017611_kidney 11 .69 RPM
SRP017611_liver 1 .02 RPM
SRP012049_cerebellum 1 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012288 ortholog_one2one 1 retrogene
retro_amel_1129,
Bos taurus ENSBTAG00000016093 ortholog_one2one 3 retrogenes
retro_btau_1574, retro_btau_73, retro_btau_810,
Equus caballus ENSECAG00000000216 possible_ortholog 1 retrogene
retro_ecab_971,
Felis catus ENSFCAG00000003820 ortholog_one2one 2 retrogenes
retro_fcat_1547, retro_fcat_256,
Homo sapiens ENSG00000102007 ortholog_one2one 1 retrogene
retro_hsap_3411,
Loxodonta africana ENSLAFG00000004483 ortholog_one2many 1 retrogene
retro_lafr_427,
Macaca mulatta ENSMMUG00000023022 ortholog_one2one 1 retrogene
retro_mmul_2124,
Mustela putorius furo ENSMPUG00000013817 ortholog_one2one 3 retrogenes
retro_mputfur_107, retro_mputfur_462, retro_mputfur_969,
Mus musculus ENSMUSG00000031146 possible_ortholog 1 retrogene
retro_mmus_94,
Nomascus leucogenys ENSNLEG00000001317 ortholog_one2one 1 retrogene
retro_nleu_2887,
Otolemur garnettii ENSOGAG00000003865 ortholog_one2one 3 retrogenes
retro_ogar_2568, retro_ogar_2865, retro_ogar_473,
Pan troglodytes ENSPTRG00000021885 ortholog_one2one 1 retrogene
retro_ptro_2316,
Pteropus vampyrus ENSPVAG00000011770 possible_ortholog 2 retrogenes
retro_pvam_1214, retro_pvam_810,
Rattus norvegicus ENSRNOG00000039496 possible_ortholog 1 retrogene
retro_rnor_2686,
Tursiops truncatus ENSTTRG00000016968 ortholog_one2one 2 retrogenes
retro_ttru_1586, retro_ttru_767,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_933 62.50 78.52
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Download FASTA sequences of all ENSCAFG00000015798 retrocopies