Parental gene:

CCDC43, ENSCAFG00000014115

Aliases:None
Description:coiled-coil domain containing 43 [Source:HGNC Symbol;Acc:26472]
Organism:Dog (Canis familiaris)
Coordinates:9:18783404..18792116(+)


>ENSCAFG00000014115
ATGGCGGCGCCCAGTGAAGTGCCTGCGGCTGCCTCCGGAAAAGGCGGTGGCGGGGACGGCGGTTTTGGGTCATGGCTGGA
CGGACGGTTGGAGGCGCTGGGAGTGGACCGAGCCGTTTACGGCGCCTACATCCTGGGTGTCCTGCAGGAGGAGGAGGAAG
AAGAGAAGCTGGACGCTTTGCAGGGTATCCTCTCTGCTTTCTTGGAAGAAGATTCTCTTCTTAACATCTGCAAGGAGATT
GTGGAACGTTGGTCGGAAAGTCAGAATGTCGTCACCAAAGTGAAAAAAGAAGATGAGGTACAGGCCATTGCCACCCTAAT
TGAGAAGCAGGCACAGATTGTGGTGAAGCCCAGGATGGTGTCAGAAGAGGAGAAACAGAGAAAAGCTGCCCTTCTGGCCC
AGTATGCTGATGTGACAGATGAAGAAACCGAAGCCGATGAGAAGGATGATTCAGGTGCCACCACAATGAACATTGGTTCT
GATAAATCTCTGTTCCGAAACACCAATGTGGAAGATGTCCTCAATGCCCGAAAACTGGAGCGAGACTCACTTCGGGATGA
GTCCCAGAGGAAGAAGGAACAGGACAAGCTGCAGAGGGAGAGGGACAAACTAGCCAAGCAGGAGCGCAAGGAAAAGGAAA
AGAAAAGGACACAAAGAGGGGAGCGGAAGCGATAA

Library Parental gene expression (RPM)
SRP017611_brain 8 .73 RPM
SRP017611_kidney 12 .94 RPM
SRP017611_liver 11 .09 RPM
SRP012049_cerebellum 9 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018379 ortholog_one2one 1 retrogene
retro_amel_1479,
Monodelphis domestica ENSMODG00000011411 ortholog_one2one 1 retrogene
retro_mdom_1378,
Mustela putorius furo ENSMPUG00000009224 ortholog_one2one 1 retrogene
retro_mputfur_1511,
Oryctolagus cuniculus ENSOCUG00000017526 ortholog_one2one 1 retrogene
retro_ocun_1500,
Ochotona princeps ENSOPRG00000006793 ortholog_one2one 2 retrogenes
retro_opri_263, retro_opri_699,
Rattus norvegicus ENSRNOG00000002748 ortholog_one2one 1 retrogene
retro_rnor_2906,
Sus scrofa ENSSSCG00000017352 ortholog_one2many 2 retrogenes
retro_sscr_173, retro_sscr_944,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_456 70.00 70.98
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Download FASTA sequences of all ENSCAFG00000014115 retrocopies