Parental gene: | SDAD1, ENSCAFG00000008521 |
| Aliases: | None |
| Description: | SDA1 domain containing 1 [Source:HGNC Symbol;Acc:25537] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 32:514696..538152(-) |
>ENSCAFG00000008521
TCAGCAACCAGCATGTCTAACAGAAACAATAACAAGCTGCCCAGCAACCTGCCACAGTTACAGAATCTGATCAAGCGGGA
TCCGCCCGCCTACGTCGAGGAGTTTCTACAGCAGTATAATCACTACGAATCCAATGTGGCGGTTTTTAAATTACAACCAA
ATAAACCTAGCAAAGAACTGGCAGAGCTAGTGATGTTTATGGCACAGATTGGTCACTGCTACCCAGAACATTTAAGTAAC
TTTCCCCAAGAGCTGAAAGATCTTCTCTCCTACAATCACACTGTCTTGGATCCAGATCTTCGAATGACATTTTGCAAAGC
TTTGATCTTGCTGAGAAATAAGAATCTCATCAATCCATCAAGTTTGCTAGAACTTTTCTTTGAACTTCTGCGTTGCCATG
ATAAGCTTCTGCGAAAGACTTTATACACACATATTGTCACTGATATCAAGAATATAAATGCAAAACACAAGAACAATAAA
GTGAATATTGTGTTGCAGAATTTCATGTACACCATGTTAAGAGATAGCAATGCAACTGCAGCCAAGATATCTTTGGATGT
GATGATTGAACTCTACAGAAGAAACATCTGGAATGATGCCAAAACTGTCAATGTGATCACAACGGCATGTTTCTCTAAGG
TCACCAAGATATTAGTTGCTGCTTTGACATTTTTCCTTGGGAAAGATGAAGAGGAGAAACAGGACAGCGACTCAGAATCC
GAGGTTAAACATTCAACCATAGATGCTTCTGAACTTTACAGTAGTCTATCTGATTTCATTATTACTGTTGGTACAGATTA
TAAAATCCATGACTTCTCAATTTTATTTCAGAAACAAAAAAAGAAGAAGAAACCAGAGGTGTTTAACTTTTCAGCTATTC
ATCTGATTCATGATCCCCAAGATTTTGCAGAAAAATTATTAAAACAACTAGAGAGCTCTACGGAGAGGTTTGAGGTGAAA
ATGATGCTCATGAACCTCATCTCCAGATTGGTGGGAATTCATGAGCTTTTTCTCTTCAACTTCTATCCCTTTGTACAAAG
ATTTCTGCAACCCCACCAAAGAGAAGTAACAAAGATCCTTCTGTTTGCTGCCCAAGCATCTCATCACTTAGTACCCCCAG
AGATCATTCAGTCAGTGCTCATGACTGTGGCCAACAATTTTGTCACCGACAAGAATTCTGGGGAGGTCATGACAGTAGGA
ATCAATGCTATAAAAGAAATAACAGCTCGATGTCCTCTAGCCATGACTGAAGAACTTCTCCAAGACCTAGTTCAGTATAA
AACACACAGAGATAAGAATGTGATGATGTCTGCTAGAACTTTGATTCAGCTCTTCCGAACACTGAATCCTAAGATGTTGC
AGAAGAAATTCCGGGGCAAGCCTACAGAGGCCTCCATAGAAGCAAGAGTGCAAGAATATGGAGAATTAGATGCTAAAGAT
TACATTCCAGGAGCAGAAGTTCTAGAAGTTGGAAAAGAAGAGAATGCTGAAAATGTTGAAGGAGATGGGTGGGAAAGTAC
CAGTCTCAGTGAGGAGGCAGATGCTGATGGTGAGTGGATTGATGTGCATCATTCTTCTGATGAAGAGCAGCAAGAAATAT
TCAAGAAGCTCAACGGGATGCCCATGGAGGAGCGGAAAGCCAAAGCTGCAGCCATTAGCACGAGCCGAGTTCTAACTCAG
GAAGACTTCCAGAAAATCCGCATAGCCCAAATGAGGAAAGAACTCGACGCTACCCCAGGGAAAGCCCAAAAGAGGAAATA
TATTGAAATAGATAATGATGAGGAGCCCAGGGGTGAGTTACTTTCTCTTCGGGACATTGAACGCCTTCATAAAAAGCCAA
AATCTGACAAGGAGACAAGACTAGCAACAGCAGTGGCTGGAAAGACAGACCGAAAAGAATTTGTGAGGAAGAAAACCAAA
ATGAACCCATTTTCCAGTTCCACAAATAAAGAGAAGAAAAAACAGAAGAACTTTATGATGATGCGATATAGCCATAACGT
CCGGTCAAAAAACAAGCGTTCCTTCCGAGAAAAGCAGCTGGCACTACGAGATGCACTTTTGAAAAAGAGAAAAAGAATGA
AGTAA
TCAGCAACCAGCATGTCTAACAGAAACAATAACAAGCTGCCCAGCAACCTGCCACAGTTACAGAATCTGATCAAGCGGGA
TCCGCCCGCCTACGTCGAGGAGTTTCTACAGCAGTATAATCACTACGAATCCAATGTGGCGGTTTTTAAATTACAACCAA
ATAAACCTAGCAAAGAACTGGCAGAGCTAGTGATGTTTATGGCACAGATTGGTCACTGCTACCCAGAACATTTAAGTAAC
TTTCCCCAAGAGCTGAAAGATCTTCTCTCCTACAATCACACTGTCTTGGATCCAGATCTTCGAATGACATTTTGCAAAGC
TTTGATCTTGCTGAGAAATAAGAATCTCATCAATCCATCAAGTTTGCTAGAACTTTTCTTTGAACTTCTGCGTTGCCATG
ATAAGCTTCTGCGAAAGACTTTATACACACATATTGTCACTGATATCAAGAATATAAATGCAAAACACAAGAACAATAAA
GTGAATATTGTGTTGCAGAATTTCATGTACACCATGTTAAGAGATAGCAATGCAACTGCAGCCAAGATATCTTTGGATGT
GATGATTGAACTCTACAGAAGAAACATCTGGAATGATGCCAAAACTGTCAATGTGATCACAACGGCATGTTTCTCTAAGG
TCACCAAGATATTAGTTGCTGCTTTGACATTTTTCCTTGGGAAAGATGAAGAGGAGAAACAGGACAGCGACTCAGAATCC
GAGGTTAAACATTCAACCATAGATGCTTCTGAACTTTACAGTAGTCTATCTGATTTCATTATTACTGTTGGTACAGATTA
TAAAATCCATGACTTCTCAATTTTATTTCAGAAACAAAAAAAGAAGAAGAAACCAGAGGTGTTTAACTTTTCAGCTATTC
ATCTGATTCATGATCCCCAAGATTTTGCAGAAAAATTATTAAAACAACTAGAGAGCTCTACGGAGAGGTTTGAGGTGAAA
ATGATGCTCATGAACCTCATCTCCAGATTGGTGGGAATTCATGAGCTTTTTCTCTTCAACTTCTATCCCTTTGTACAAAG
ATTTCTGCAACCCCACCAAAGAGAAGTAACAAAGATCCTTCTGTTTGCTGCCCAAGCATCTCATCACTTAGTACCCCCAG
AGATCATTCAGTCAGTGCTCATGACTGTGGCCAACAATTTTGTCACCGACAAGAATTCTGGGGAGGTCATGACAGTAGGA
ATCAATGCTATAAAAGAAATAACAGCTCGATGTCCTCTAGCCATGACTGAAGAACTTCTCCAAGACCTAGTTCAGTATAA
AACACACAGAGATAAGAATGTGATGATGTCTGCTAGAACTTTGATTCAGCTCTTCCGAACACTGAATCCTAAGATGTTGC
AGAAGAAATTCCGGGGCAAGCCTACAGAGGCCTCCATAGAAGCAAGAGTGCAAGAATATGGAGAATTAGATGCTAAAGAT
TACATTCCAGGAGCAGAAGTTCTAGAAGTTGGAAAAGAAGAGAATGCTGAAAATGTTGAAGGAGATGGGTGGGAAAGTAC
CAGTCTCAGTGAGGAGGCAGATGCTGATGGTGAGTGGATTGATGTGCATCATTCTTCTGATGAAGAGCAGCAAGAAATAT
TCAAGAAGCTCAACGGGATGCCCATGGAGGAGCGGAAAGCCAAAGCTGCAGCCATTAGCACGAGCCGAGTTCTAACTCAG
GAAGACTTCCAGAAAATCCGCATAGCCCAAATGAGGAAAGAACTCGACGCTACCCCAGGGAAAGCCCAAAAGAGGAAATA
TATTGAAATAGATAATGATGAGGAGCCCAGGGGTGAGTTACTTTCTCTTCGGGACATTGAACGCCTTCATAAAAAGCCAA
AATCTGACAAGGAGACAAGACTAGCAACAGCAGTGGCTGGAAAGACAGACCGAAAAGAATTTGTGAGGAAGAAAACCAAA
ATGAACCCATTTTCCAGTTCCACAAATAAAGAGAAGAAAAAACAGAAGAACTTTATGATGATGCGATATAGCCATAACGT
CCGGTCAAAAAACAAGCGTTCCTTCCGAGAAAAGCAGCTGGCACTACGAGATGCACTTTTGAAAAAGAGAAAAAGAATGA
AGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 18 .58 RPM |
| SRP017611_kidney | 14 .59 RPM |
| SRP017611_liver | 12 .11 RPM |
| SRP012049_cerebellum | 17 .89 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000004811 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000006441 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000012217 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000006682 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017503 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000027034 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000022229 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000008974 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_515 | 92.82 | 60.23 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_1211 | 90.73 | 58.93 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000008521 retrocopies