Parental gene:

UBE2E3, ENSTSYG00000002281

Aliases:None
Description:ubiquitin-conjugating enzyme E2E 3 [Source:HGNC Symbol;Acc:12479]
Organism:Tarsier (Tarsius syrichta)
Coordinates:GeneScaffold_6496:21300..72164(+)


>ENSTSYG00000002281
ATGTGCAGTGATAGGCAAAGGTCCGATGATGAGAGCCCCAGCACCAGCAGTGGCAGTTCAGATGCGGACCAGAGAGACCC
AGCCGCTCCAGAGCCTGAAGAACAAGAAGAAAGAAAACCTTCTGCCACCCAGCAGAAGAAAAACACCAAACTCTCTAGCA
AAACCACTGCTAAGTTATCCACTAGTGCTAAAAGAATTCAGAAGGAGCTAGCTGAAATAACCCTTGATCCTCCTCCTAAC
TGCAGTGCTGGGCCTAAAGGAGATAATATTTATGAGTGGAGATCAACTATACTTGGTCCACCAGGTTCTGTATATGAAGG
TGGTGTGTTTTTTCTGGATATCACGTTTTCATCAGATTATCCATTTAAGCCACCAAAGGTTACTTTCCGTACCAGAATCT
ATCACTGCAACATCAACAGTCAGGGAGTCATCTGTCTGGACATCCTTAAAGACAACTGGAGTCCCGCTTTGACTATTTCA
AAGGTTTTGCTGTCTATCTGTTCCCTTTTGACAGACTGCAACCCTGCGGATCCTCTGGTTGGAAGCATAGCCACTCAGTA
TTTGACCAACAGAGCAGAACATGACAGGATAGCCAGACAGTGGACCAAGAGATACGCAACATAA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000014163 ortholog_one2one 3 retrogenes
retro_cfam_2076, retro_cfam_2161, retro_cfam_27,
Choloepus hoffmanni ENSCHOG00000007325 ortholog_one2one 3 retrogenes
retro_chof_1756, retro_chof_2077, retro_chof_2358,
Ciona intestinalis ENSCING00000006860 ortholog_one2many 1 retrogene
retro_cint_33,
Callithrix jacchus ENSCJAG00000011559 ortholog_one2many 3 retrogenes
retro_cjac_3194, retro_cjac_3911, retro_cjac_3967,
Equus caballus ENSECAG00000007233 ortholog_one2one 1 retrogene
retro_ecab_196,
Echinops telfairi ENSETEG00000019324 ortholog_one2one 2 retrogenes
retro_etel_314, retro_etel_848,
Homo sapiens ENSG00000170035 ortholog_one2one 1 retrogene
retro_hsap_4653,
Macaca mulatta ENSMMUG00000008069 ortholog_one2one 2 retrogenes
retro_mmul_1382, retro_mmul_1834,
Monodelphis domestica ENSMODG00000010301 ortholog_one2one 2 retrogenes
retro_mdom_1679, retro_mdom_1688,
Mus musculus ENSMUSG00000027011 ortholog_one2one 4 retrogenes
retro_mmus_2814, retro_mmus_3123, retro_mmus_3416, retro_mmus_3571,
Nomascus leucogenys ENSNLEG00000006290 ortholog_one2one 1 retrogene
retro_nleu_2068,
Otolemur garnettii ENSOGAG00000014956 ortholog_one2one 4 retrogenes
retro_ogar_1343, retro_ogar_2512, retro_ogar_2682, retro_ogar_3443,
Pongo abelii ENSPPYG00000012987 ortholog_one2one 1 retrogene
retro_pabe_3614,
Rattus norvegicus ENSRNOG00000004544 ortholog_one2one 1 retrogene
retro_rnor_1236,
Tupaia belangeri ENSTBEG00000009932 ortholog_one2one 2 retrogenes
retro_tbel_1986, retro_tbel_3294,
Tarsius syrichta ENSTSYG00000000595 other_paralog 14 retrogenes
retro_tsyr_1007, retro_tsyr_1145, retro_tsyr_1162, retro_tsyr_1314, retro_tsyr_1392, retro_tsyr_1415, retro_tsyr_1677, retro_tsyr_1694, retro_tsyr_1859, retro_tsyr_683, retro_tsyr_789, retro_tsyr_836, retro_tsyr_838, retro_tsyr_919,
Tarsius syrichta ENSTSYG00000005459 other_paralog 1 retrogene
retro_tsyr_1421,
Tarsius syrichta ENSTSYG00000011229 other_paralog 3 retrogenes
retro_tsyr_1217, retro_tsyr_1430, retro_tsyr_501,
Tursiops truncatus ENSTTRG00000001361 ortholog_one2one 1 retrogene
retro_ttru_1056,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tsyr_457 89.22 80.19
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2. retro_tsyr_1393 78.95 63.29
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3. retro_tsyr_1809 92.50 95.65
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4. retro_tsyr_1842 80.00 58.94
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5. retro_tsyr_1942 94.69 100.00
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Download FASTA sequences of all ENSTSYG00000002281 retrocopies