Parental gene:

BRIX1, ENSTBEG00000011652

Aliases:None
Description:BRX1, biogenesis of ribosomes, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24170]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_192:336593..347833(+)


>ENSTBEG00000011652
GGCAAGTGGAAAAATAAGGAACGAATTCTCATCTTTTCTTCCAGAGGAATTAATTTTAGAACAAGACATTTAATGCAGGA
CTTGAGGACGCTGATGCCTCATTCTAAAGCGGATACTAAAATGGATCGTAAAGATAAATTATTTGTGATTAATGAGGTCT
GTGAAATGAAAAACTGCAATAAATGTATCTATTTTGAAGCTAAGAAAAAACAGGATCTCTATATGTGNNNNNNNNNNNNN
NNNNNNNNNNNNTCTGCTAATCCTGTTCAAAGTATTCATACCCTTGCTGAACTAAAGCTGACTGGAAATTGTTTGAAAGG
TTCTCGGCCCCTATTGTCTTTTGATCCTGCTTTTGATGAATTACCACATTATGCTTTATTAAAAGAACTCTTAATTCAGA
TCTTTAGTACACCACGGTATCATCCTAAAAGTCAACCATTTGTGGACCATGTGTTTACTTTCACCATTTTGGATCATAGG
ATATGGTTTCGAAACTTTCAGATTATAGAAGAAGATGCTGCTCTTGTAGAAATAGGACCTCGTTTTGTTCTAAACCTTAT
AAAGATTTTCCAGGGGAGTTTTGGAGGACCAACTTTATATGAAAATCCTCACTACCAGTCACCAAACATGCATCGGCGTA
TTGTAAGATCCATGACTGCTGCAAAATACAGGGAGAAGCAGCAAGTGAAGGATGTGCAGAAGCTGAGAAAGAAAGAGCCA
AAGACTATTCTTCCTCACGATCCCACTGAAGATGTTTTTGCTATACCAGCTGAGGAGAAACCAGTAGAAATACAGTGGGT
AAAACCAGAGCCAAAAGTCGATTTGAAAGCAAGAAAGAAAAGGATTTACAAAAGGCATAGAAAAATGCAGAAGAAGATGG
ACAGTAGGAATACAAAATGA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001790 ortholog_one2many 2 retrogenes
retro_chof_1664, retro_chof_1776,
Callithrix jacchus ENSCJAG00000018506 ortholog_one2one 1 retrogene
retro_cjac_1389,
Homo sapiens ENSG00000113460 ortholog_one2one 1 retrogene
retro_hsap_3954,
Gorilla gorilla ENSGGOG00000004225 ortholog_one2one 1 retrogene
retro_ggor_2657,
Loxodonta africana ENSLAFG00000007249 ortholog_one2one 1 retrogene
retro_lafr_1116,
Myotis lucifugus ENSMLUG00000029255 ortholog_one2one 3 retrogenes
retro_mluc_1402, retro_mluc_707, retro_mluc_963,
Macaca mulatta ENSMMUG00000000442 ortholog_one2one 1 retrogene
retro_mmul_2289,
Monodelphis domestica ENSMODG00000020386 ortholog_one2one 1 retrogene
retro_mdom_1032,
Nomascus leucogenys ENSNLEG00000014452 ortholog_one2one 1 retrogene
retro_nleu_533,
Otolemur garnettii ENSOGAG00000014827 ortholog_one2one 2 retrogenes
retro_ogar_3116, retro_ogar_793,
Pongo abelii ENSPPYG00000015390 ortholog_one2one 2 retrogenes
retro_pabe_3258, retro_pabe_3379,
Pan troglodytes ENSPTRG00000016784 ortholog_one2one 1 retrogene
retro_ptro_2684,
Rattus norvegicus ENSRNOG00000018021 ortholog_one2one 1 retrogene
retro_rnor_1140,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_954 70.37 62.54
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2. retro_tbel_1963 74.06 96.66
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3. retro_tbel_1964 79.35 91.30
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4. retro_tbel_2981 71.84 57.53
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5. retro_tbel_3002 73.84 56.19
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6. retro_tbel_3082 70.67 93.31
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7. retro_tbel_4194 88.89 56.86
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8. retro_tbel_4229 82.16 70.57
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9. retro_tbel_4418 82.59 73.58
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Download FASTA sequences of all ENSTBEG00000011652 retrocopies