Parental gene:

BRIX1, ENSGGOG00000004225

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:17:58805731..58816318(-)


>ENSGGOG00000004225
ATGGCGGCAACCAAGAGGAAACGGCGTGGAGGCTTTGCAGTTCAGGCGAAGAAGCCAAAAAGGAACGAAAAAGATGCAGA
GCCGCCAGCTAAGCGGCACGCCACAGCAGAGGAGGTGGAGGAAGAAGAGAGGAACCGGATCCCAGGCCCCGTTTGCAAGG
GAAAGTGGAAAAATAAGGAACGGATTCTCATCTTTTCTTCCAGAGGAATAAATTTTAGAACAAGACATTTAATGCAGGAC
TTGAGAATGTTGATGCCTCATTCTAAAGCAGATACTAAAATGGATCGTAAGGATAAGCTATTTGTGATTAACGAGGTTTG
TGAAATGAAGAACTGTAATAAATGCATCTATTTTGAAGCTAAGAAAAAACAGGATCTGTATATGTGGCTTTCAAATTCAC
CTCACGGACCATCTGCTAAATTCCTTGTTCAAAATATTCATACCCTCGCTGAACTAAAGATGACTGGAAACTGTTTGAAA
GGTTCTCGGCCCCTTTTGTCTTTTGACCCTGCTTTTGATGAATTACCACATTATGCTTTGTTAAAAGAACTCTTAATTCA
GATCTTTAGTACACCACGGTATCATCCCAAAAGCCAACCATTTGTGGACCACGTATTTACTTTCACCATTTTGGATAATA
GGATATGGTTTCGGAACTTTCAGATCATAGAAGAAGATGCTGCTCTTGTAGAAATAGGACCTCGTTTTGTCTTAAATCTC
ATAAAGATTTTCCAGGGAAGTTTTGGAGGACCAACTTTATATGAAAATCCTCACTACCAGTCACCAAACATGCATCGGCG
TGTCATAAGATCCATCACAGCTGCAAAATACAGAGAGAAACAGCAAGTGAAAGATGTGCAAAAACTGAGAAAGAAAGAGC
CAAAGACTCTTCTTCCACATGATCCCACTGCAGACGTTTTTGTCACACCAGCTGAGGAGAAACCAATAGAAATACAGTGG
GTAAAACCAGAGCCAAAAGTTGATTTGAAAGCAAGAAAGAAACGGATTTACAAAAGGCAAAGAAAAATGAAACAGAGGAT
GGACAGTGGGAAAACAAAATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 6 .14 RPM
SRP007412_cerebellum 6 .54 RPM
SRP007412_heart 1 .19 RPM
SRP007412_kidney 7 .81 RPM
SRP007412_liver 6 .38 RPM
SRP007412_testis 14 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001790 ortholog_one2many 2 retrogenes
retro_chof_1664, retro_chof_1776,
Callithrix jacchus ENSCJAG00000018506 ortholog_one2one 1 retrogene
retro_cjac_1389,
Homo sapiens ENSG00000113460 ortholog_one2one 1 retrogene
retro_hsap_3954,
Loxodonta africana ENSLAFG00000007249 ortholog_one2one 1 retrogene
retro_lafr_1116,
Myotis lucifugus ENSMLUG00000029255 ortholog_one2one 3 retrogenes
retro_mluc_1402, retro_mluc_707, retro_mluc_963,
Macaca mulatta ENSMMUG00000000442 ortholog_one2one 1 retrogene
retro_mmul_2289,
Monodelphis domestica ENSMODG00000020386 ortholog_one2one 1 retrogene
retro_mdom_1032,
Nomascus leucogenys ENSNLEG00000014452 ortholog_one2one 1 retrogene
retro_nleu_533,
Otolemur garnettii ENSOGAG00000014827 ortholog_one2one 2 retrogenes
retro_ogar_3116, retro_ogar_793,
Pongo abelii ENSPPYG00000015390 ortholog_one2one 2 retrogenes
retro_pabe_3258, retro_pabe_3379,
Pan troglodytes ENSPTRG00000016784 ortholog_one2one 1 retrogene
retro_ptro_2684,
Rattus norvegicus ENSRNOG00000018021 ortholog_one2one 1 retrogene
retro_rnor_1140,
Tupaia belangeri ENSTBEG00000011652 ortholog_one2one 9 retrogenes
retro_tbel_1963, retro_tbel_1964, retro_tbel_2981, retro_tbel_3002, retro_tbel_3082, retro_tbel_4194, retro_tbel_4229, retro_tbel_4418, retro_tbel_954,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2657 74.34 85.27
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Download FASTA sequences of all ENSGGOG00000004225 retrocopies