Parental gene:

RPL6, ENSTBEG00000008626

Aliases:None
Description:ribosomal protein L6 [Source:HGNC Symbol;Acc:10362]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_5528:473021..493050(-)


>ENSTBEG00000008626
ATGGCAGGCGATAAAGCTGCAAAGCAGGATACTAAGGAGAAGAAACCTGAAGCCAAGAAGGCTGATGCCAGTGGCAAGGT
TAAAAAGGATGACCCTAAGGCTAAAAAGCCCAAGAAGGGAAAGCCCCATTGCAGCCGAAACCCTGTCCTAGTCCGGGGCA
TCGGCAGATATTCCCGGTCTGCCATGTATTCCAGGAAGGCCATGTACAAGAGGAAATACTCGGCCACTAAATCCAGGATC
GAAAAGAAAAAGAAGGAGAAGGTTCTTGCGACTGTCACAAAACCGGTTGGTGGAGACAAGAATGGTGGTACCCGGGTGGT
TAAACTGCGCAAAATGCCTAGGTATTGTCTTACTGAAGTGCCTCGAAAGCTGTTGAGCCATGGCAAAAAACCCTTCAGTC
AGCATGTGAGAAAGCTGCGAGCTAGCATCACCCCTGGGACCTTTTTGTTCATCCTCACTGGACCCCCCAGAGGCAAGAGA
GTAGTTTTCCTGAAGCAGCTGAGCAGTGGCTTGCTACTTGTAACTGGACCGCTAGTTCTCAATCGAGTTCCACTGCGTAG
AACACACCAGAAATTCGTCATTGCCACCTCCACGAAAATTGATATTAGCAAAGTAAAAATCCCAAAGCACCTTACCGATG
CTTACTTCAAGAAAAAGAAACTGCGGAAGCCCAGACACCAGGAAGGTGAGATCTTCGACACAGAGAAGGAGAAATACGAG
ATTTCAGAGCAGCGCAAGATTGATCAGAAAGCTGTGGATTCGCAAATTTTGCCAAAAATCAAAGCTGTTCCTCAGCTCCA
GGGCTACCTGCGATCCGTGTTTGCCCTTACAAATGGAGTCTATCCTCACAAATTGGTGTTCTAG

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000003060 ortholog_one2many 1 retrogene
retro_acar_171,
Ailuropoda melanoleuca ENSAMEG00000008510 ortholog_one2one 10 retrogenes
retro_amel_1202, retro_amel_1241, retro_amel_1611, retro_amel_1677, retro_amel_1682, retro_amel_1807, retro_amel_407, retro_amel_464, retro_amel_891, retro_amel_981,
Bos taurus ENSBTAG00000031723 possible_ortholog 6 retrogenes
retro_btau_1038, retro_btau_1117, retro_btau_1305, retro_btau_16, retro_btau_424, retro_btau_809,
Canis familiaris ENSCAFG00000008873 ortholog_one2many 1 retrogene
retro_cfam_36,
Callithrix jacchus ENSCJAG00000012450 possible_ortholog 7 retrogenes
retro_cjac_1362, retro_cjac_1620, retro_cjac_1949, retro_cjac_2723, retro_cjac_328, retro_cjac_349, retro_cjac_497,
Cavia porcellus ENSCPOG00000013526 possible_ortholog 8 retrogenes
retro_cpor_1105, retro_cpor_1149, retro_cpor_1486, retro_cpor_382, retro_cpor_412, retro_cpor_651, retro_cpor_731, retro_cpor_982,
Equus caballus ENSECAG00000017514 possible_ortholog 1 retrogene
retro_ecab_811,
Felis catus ENSFCAG00000006858 ortholog_one2many 12 retrogenes
retro_fcat_1264, retro_fcat_1370, retro_fcat_1844, retro_fcat_232, retro_fcat_398, retro_fcat_500, retro_fcat_625, retro_fcat_637, retro_fcat_643, retro_fcat_690, retro_fcat_926, retro_fcat_935,
Gorilla gorilla ENSGGOG00000003372 possible_ortholog 16 retrogenes
retro_ggor_1602, retro_ggor_1893, retro_ggor_1898, retro_ggor_2047, retro_ggor_2138, retro_ggor_236, retro_ggor_2569, retro_ggor_2597, retro_ggor_2709, retro_ggor_2745, retro_ggor_290, retro_ggor_2938, retro_ggor_356, retro_ggor_426, retro_ggor_566, retro_ggor_816,
Macaca mulatta ENSMMUG00000007433 possible_ortholog 1 retrogene
retro_mmul_171,
Monodelphis domestica ENSMODG00000003096 ortholog_one2one 4 retrogenes
retro_mdom_1556, retro_mdom_1624, retro_mdom_1784, retro_mdom_615,
Mustela putorius furo ENSMPUG00000002526 ortholog_one2one 9 retrogenes
retro_mputfur_1116, retro_mputfur_1279, retro_mputfur_1320, retro_mputfur_1367, retro_mputfur_1407, retro_mputfur_1445, retro_mputfur_1489, retro_mputfur_401, retro_mputfur_571,
Mus musculus ENSMUSG00000029614 possible_ortholog 13 retrogenes
retro_mmus_1264, retro_mmus_1336, retro_mmus_1898, retro_mmus_2684, retro_mmus_276, retro_mmus_3065, retro_mmus_3579, retro_mmus_3611, retro_mmus_3622, retro_mmus_3719, retro_mmus_445, retro_mmus_465, retro_mmus_730,
Nomascus leucogenys ENSNLEG00000027093 possible_ortholog 2 retrogenes
retro_nleu_1813, retro_nleu_43,
Oryctolagus cuniculus ENSOCUG00000003802 possible_ortholog 5 retrogenes
retro_ocun_129, retro_ocun_17, retro_ocun_189, retro_ocun_229, retro_ocun_245,
Pongo abelii ENSPPYG00000025855 possible_ortholog 13 retrogenes
retro_pabe_1764, retro_pabe_1891, retro_pabe_2451, retro_pabe_2493, retro_pabe_2573, retro_pabe_2897, retro_pabe_3314, retro_pabe_358, retro_pabe_3677, retro_pabe_3725, retro_pabe_43, retro_pabe_472, retro_pabe_868,
Pteropus vampyrus ENSPVAG00000012409 ortholog_one2one 2 retrogenes
retro_pvam_1001, retro_pvam_876,
Rattus norvegicus ENSRNOG00000025936 possible_ortholog 1 retrogene
retro_rnor_129,
Sarcophilus harrisii ENSSHAG00000007096 ortholog_one2many 2 retrogenes
retro_shar_506, retro_shar_536,
Ictidomys tridecemlineatus ENSSTOG00000009409 possible_ortholog 3 retrogenes
retro_itri_1024, retro_itri_1125, retro_itri_684,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_72 65.85 55.05
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2. retro_tbel_75 82.84 70.03
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3. retro_tbel_77 64.89 95.82
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4. retro_tbel_81 72.02 74.91
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5. retro_tbel_85 86.69 100.00
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6. retro_tbel_86 86.78 60.63
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7. retro_tbel_104 87.46 100.00
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8. retro_tbel_105 64.25 60.63
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9. retro_tbel_109 87.58 53.31
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10. retro_tbel_111 86.46 100.00
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11. retro_tbel_118 91.48 77.35
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12. retro_tbel_120 89.64 96.86
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13. retro_tbel_128 85.00 96.86
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14. retro_tbel_132 83.26 76.31
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15. retro_tbel_139 86.08 54.70
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16. retro_tbel_144 82.19 99.65
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17. retro_tbel_150 77.83 68.99
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18. retro_tbel_158 85.51 71.43
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19. retro_tbel_165 67.52 54.36
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20. retro_tbel_181 63.68 72.47
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21. retro_tbel_186 81.88 100.00
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22. retro_tbel_187 92.42 73.17
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23. retro_tbel_190 85.07 75.61
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24. retro_tbel_191 84.25 100.00
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25. retro_tbel_192 83.63 96.86
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26. retro_tbel_203 81.57 88.15
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27. retro_tbel_212 86.55 100.00
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28. retro_tbel_214 81.72 99.30
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29. retro_tbel_215 83.39 93.73
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30. retro_tbel_218 86.76 70.38
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31. retro_tbel_219 92.01 100.00
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32. retro_tbel_225 84.41 91.29
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33. retro_tbel_227 79.46 76.31
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34. retro_tbel_231 85.86 100.00
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35. retro_tbel_233 79.11 54.70
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36. retro_tbel_242 86.21 100.00
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37. retro_tbel_243 68.27 71.43
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38. retro_tbel_252 74.49 82.58
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39. retro_tbel_253 79.05 86.06
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40. retro_tbel_255 86.85 100.00
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41. retro_tbel_256 77.30 63.07
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42. retro_tbel_260 81.95 70.38
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43. retro_tbel_278 78.67 51.92
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44. retro_tbel_284 88.43 83.97
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45. retro_tbel_287 76.15 74.91
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46. retro_tbel_288 77.25 55.75
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47. retro_tbel_291 81.66 100.00
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48. retro_tbel_297 84.71 58.54
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49. retro_tbel_300 86.30 75.26
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50. retro_tbel_308 84.07 100.00
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51. retro_tbel_313 77.78 52.61
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52. retro_tbel_318 83.04 58.89
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53. retro_tbel_321 93.43 100.00
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54. retro_tbel_327 87.50 100.00
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55. retro_tbel_334 81.82 76.31
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56. retro_tbel_351 88.10 86.76
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57. retro_tbel_357 71.66 81.18
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58. retro_tbel_365 84.14 99.65
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59. retro_tbel_368 79.65 77.00
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60. retro_tbel_369 63.06 54.01
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61. retro_tbel_376 71.92 88.85
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62. retro_tbel_380 74.91 100.00
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63. retro_tbel_403 86.55 100.00
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64. retro_tbel_409 81.93 81.18
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65. retro_tbel_424 88.89 58.89
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66. retro_tbel_434 85.51 97.56
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67. retro_tbel_437 87.54 100.00
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68. retro_tbel_452 70.25 54.36
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69. retro_tbel_464 81.72 100.00
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70. retro_tbel_469 71.97 54.36
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71. retro_tbel_478 84.33 73.52
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72. retro_tbel_486 77.45 81.18
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73. retro_tbel_493 85.14 50.87
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74. retro_tbel_497 64.06 73.17
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75. retro_tbel_498 76.50 74.56
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76. retro_tbel_505 60.81 50.87
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77. retro_tbel_506 83.41 79.09
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78. retro_tbel_515 86.05 100.00
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79. retro_tbel_516 75.58 59.58
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80. retro_tbel_520 79.29 57.49
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81. retro_tbel_523 76.55 100.00
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82. retro_tbel_524 86.91 95.12
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83. retro_tbel_529 78.22 69.34
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84. retro_tbel_533 85.38 89.55
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85. retro_tbel_546 79.70 94.08
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86. retro_tbel_548 72.55 52.96
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87. retro_tbel_549 84.62 76.31
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88. retro_tbel_554 91.57 61.67
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89. retro_tbel_557 85.19 55.75
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90. retro_tbel_562 92.17 79.79
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91. retro_tbel_568 77.88 75.26
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92. retro_tbel_571 85.86 100.00
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93. retro_tbel_581 92.36 54.70
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94. retro_tbel_589 90.21 81.53
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95. retro_tbel_608 84.82 76.66
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96. retro_tbel_624 84.19 86.41
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97. retro_tbel_625 75.00 53.66
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98. retro_tbel_629 75.00 57.84
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99. retro_tbel_630 81.33 57.14
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100. retro_tbel_642 79.66 61.67
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101. retro_tbel_651 69.65 87.11
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102. retro_tbel_652 67.78 91.99
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103. retro_tbel_653 88.02 57.49
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104. retro_tbel_656 92.36 100.00
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105. retro_tbel_660 76.67 51.92
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106. retro_tbel_663 84.85 78.40
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107. retro_tbel_668 84.48 100.00
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108. retro_tbel_672 71.23 71.43
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109. retro_tbel_684 77.85 55.05
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110. retro_tbel_685 80.80 77.00
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111. retro_tbel_690 85.87 63.41
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112. retro_tbel_693 87.06 87.80
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113. retro_tbel_694 86.54 89.55
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114. retro_tbel_699 86.93 52.61
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115. retro_tbel_708 84.08 100.00
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116. retro_tbel_712 69.32 60.28
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117. retro_tbel_717 88.89 100.00
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118. retro_tbel_719 75.64 53.31
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119. retro_tbel_723 75.17 100.00
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120. retro_tbel_724 94.64 77.35
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121. retro_tbel_731 75.68 77.00
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122. retro_tbel_748 83.22 100.00
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123. retro_tbel_769 65.66 56.10
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124. retro_tbel_773 77.73 75.26
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125. retro_tbel_775 81.67 61.32
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126. retro_tbel_778 87.54 100.00
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127. retro_tbel_785 72.15 74.91
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128. retro_tbel_797 89.10 92.33
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129. retro_tbel_837 74.34 51.92
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130. retro_tbel_847 77.06 58.89
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131. retro_tbel_855 86.46 65.85
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132. retro_tbel_858 82.23 98.61
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133. retro_tbel_876 89.20 99.65
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134. retro_tbel_879 76.60 64.46
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135. retro_tbel_890 86.33 88.50
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136. retro_tbel_894 71.73 96.86
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137. retro_tbel_895 69.32 59.23
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138. retro_tbel_896 82.83 80.14
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139. retro_tbel_904 76.43 54.36
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140. retro_tbel_933 84.68 81.18
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141. retro_tbel_944 81.25 100.00
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142. retro_tbel_948 77.05 63.07
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143. retro_tbel_951 71.53 94.08
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144. retro_tbel_977 83.97 54.01
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145. retro_tbel_1003 92.15 83.62
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146. retro_tbel_1011 72.79 50.52
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147. retro_tbel_1018 85.92 98.61
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148. retro_tbel_1025 87.89 64.46
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149. retro_tbel_1035 66.11 61.67
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150. retro_tbel_1039 76.06 63.76
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151. retro_tbel_1041 80.77 98.61
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152. retro_tbel_1042 78.67 77.70
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153. retro_tbel_1064 72.73 78.75
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154. retro_tbel_1074 76.09 79.44
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155. retro_tbel_1077 80.00 50.17
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156. retro_tbel_1080 82.35 88.15
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157. retro_tbel_1085 80.52 52.61
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158. retro_tbel_1094 89.38 100.00
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159. retro_tbel_1096 82.50 68.64
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160. retro_tbel_1097 74.50 100.00
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161. retro_tbel_1110 87.80 99.65
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162. retro_tbel_1116 84.96 78.40
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163. retro_tbel_1124 78.20 100.00
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164. retro_tbel_1131 87.54 99.65
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165. retro_tbel_1142 88.89 99.65
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166. retro_tbel_1145 80.77 88.85
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167. retro_tbel_1157 84.71 54.36
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168. retro_tbel_1159 85.47 58.89
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169. retro_tbel_1163 87.54 100.00
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170. retro_tbel_1172 83.77 52.96
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171. retro_tbel_1187 88.46 54.01
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172. retro_tbel_1192 81.64 71.43
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173. retro_tbel_1197 89.69 100.00
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174. retro_tbel_1211 86.25 100.00
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175. retro_tbel_1212 84.18 54.36
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176. retro_tbel_1214 77.93 100.00
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177. retro_tbel_1221 85.22 100.00
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178. retro_tbel_1234 89.07 63.41
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179. retro_tbel_1236 81.76 50.52
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180. retro_tbel_1238 84.12 80.49
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181. retro_tbel_1240 68.34 89.55
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182. retro_tbel_1242 84.25 100.00
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417. retro_tbel_3064 85.17 100.00
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418. retro_tbel_3066 70.00 71.78
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419. retro_tbel_3068 72.11 50.17
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420. retro_tbel_3078 74.52 70.73
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421. retro_tbel_3083 82.39 54.70
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422. retro_tbel_3086 75.92 82.93
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423. retro_tbel_3113 69.36 58.89
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424. retro_tbel_3124 88.89 67.60
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425. retro_tbel_3128 81.39 93.38
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426. retro_tbel_3131 75.29 58.54
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427. retro_tbel_3133 71.07 54.70
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428. retro_tbel_3139 75.80 95.47
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429. retro_tbel_3146 91.03 100.00
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430. retro_tbel_3157 88.17 58.54
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431. retro_tbel_3158 78.98 54.70
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432. retro_tbel_3163 88.61 54.70
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433. retro_tbel_3166 82.65 100.00
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434. retro_tbel_3169 81.45 75.26
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435. retro_tbel_3176 79.27 56.10
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436. retro_tbel_3177 86.60 72.47
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437. retro_tbel_3178 83.18 73.17
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438. retro_tbel_3185 88.24 100.00
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439. retro_tbel_3199 68.28 99.65
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440. retro_tbel_3206 81.37 55.40
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441. retro_tbel_3221 70.00 81.53
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442. retro_tbel_3225 88.84 77.00
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443. retro_tbel_3226 67.32 70.38
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444. retro_tbel_3249 85.44 53.66
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445. retro_tbel_3257 71.56 73.87
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446. retro_tbel_3263 85.43 85.02
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447. retro_tbel_3275 81.77 62.02
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448. retro_tbel_3278 87.88 57.49
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449. retro_tbel_3279 84.71 54.70
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450. retro_tbel_3289 77.43 100.00
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451. retro_tbel_3296 89.23 67.25
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452. retro_tbel_3308 85.54 57.14
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453. retro_tbel_3312 84.47 71.43
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454. retro_tbel_3319 86.59 61.32
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455. retro_tbel_3322 86.16 100.00
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456. retro_tbel_3326 83.33 100.00
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457. retro_tbel_3328 90.87 72.13
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458. retro_tbel_3348 91.38 100.00
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459. retro_tbel_3357 77.56 54.36
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460. retro_tbel_3374 85.28 66.90
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461. retro_tbel_3375 86.62 91.99
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462. retro_tbel_3382 52.50 67.60
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463. retro_tbel_3394 71.25 54.70
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464. retro_tbel_3395 89.19 50.17
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465. retro_tbel_3411 86.39 50.52
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466. retro_tbel_3427 85.11 81.53
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467. retro_tbel_3433 85.52 100.00
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468. retro_tbel_3439 91.33 52.26
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469. retro_tbel_3440 93.08 100.00
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470. retro_tbel_3455 80.10 68.99
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471. retro_tbel_3474 85.25 75.26
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472. retro_tbel_3511 86.51 100.00
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473. retro_tbel_3518 86.39 57.84
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474. retro_tbel_3521 72.43 72.82
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475. retro_tbel_3532 80.13 51.22
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476. retro_tbel_3533 85.53 52.96
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477. retro_tbel_3551 92.45 95.47
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478. retro_tbel_3553 57.06 58.54
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479. retro_tbel_3563 85.43 51.92
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480. retro_tbel_3569 70.00 60.98
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481. retro_tbel_3574 78.35 100.00
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482. retro_tbel_3579 71.59 91.29
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483. retro_tbel_3582 81.76 54.70
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484. retro_tbel_3584 81.28 63.41
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485. retro_tbel_3588 59.11 83.28
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486. retro_tbel_3594 75.62 69.69
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487. retro_tbel_3599 80.00 65.51
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488. retro_tbel_3612 78.35 100.00
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489. retro_tbel_3614 78.65 60.28
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490. retro_tbel_3629 84.68 81.18
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491. retro_tbel_3633 87.64 91.99
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492. retro_tbel_3643 85.12 100.00
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493. retro_tbel_3645 89.80 87.46
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494. retro_tbel_3646 85.17 100.00
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495. retro_tbel_3668 89.66 60.63
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496. retro_tbel_3672 82.96 76.66
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497. retro_tbel_3673 90.97 100.00
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498. retro_tbel_3706 80.18 78.40
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499. retro_tbel_3714 85.55 59.23
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500. retro_tbel_3740 87.34 55.05
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501. retro_tbel_3746 86.55 100.00
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502. retro_tbel_3753 72.68 69.69
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503. retro_tbel_3765 62.55 93.38
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504. retro_tbel_3768 76.55 100.00
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505. retro_tbel_3773 75.82 52.61
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506. retro_tbel_3778 84.30 58.89
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507. retro_tbel_3787 76.88 54.70
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508. retro_tbel_3804 85.26 53.66
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509. retro_tbel_3811 85.12 100.00
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510. retro_tbel_3817 84.80 59.23
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511. retro_tbel_3819 86.10 77.35
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512. retro_tbel_3825 71.43 78.40
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513. retro_tbel_3842 79.56 62.37
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514. retro_tbel_3845 78.01 64.46
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515. retro_tbel_3857 74.75 70.38
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516. retro_tbel_3902 74.67 51.22
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517. retro_tbel_3904 55.41 53.31
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518. retro_tbel_3906 84.36 71.78
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519. retro_tbel_3908 83.07 64.81
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520. retro_tbel_3909 78.75 55.40
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521. retro_tbel_3942 83.97 99.65
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522. retro_tbel_3943 81.20 85.02
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523. retro_tbel_3952 85.41 62.37
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524. retro_tbel_3953 72.94 58.54
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525. retro_tbel_3965 79.53 59.23
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526. retro_tbel_3978 62.21 57.49
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527. retro_tbel_3985 77.70 50.87
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528. retro_tbel_3990 73.12 62.02
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529. retro_tbel_3991 74.71 57.84
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530. retro_tbel_4000 75.80 53.66
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531. retro_tbel_4001 72.18 94.77
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532. retro_tbel_4009 74.17 51.22
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533. retro_tbel_4038 82.41 100.00
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534. retro_tbel_4040 89.66 50.17
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535. retro_tbel_4041 84.56 51.22
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536. retro_tbel_4044 79.15 96.86
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537. retro_tbel_4060 79.58 99.65
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538. retro_tbel_4108 84.71 54.70
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539. retro_tbel_4109 84.25 50.52
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540. retro_tbel_4112 68.92 51.22
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541. retro_tbel_4132 84.35 100.00
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542. retro_tbel_4140 91.07 100.00
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543. retro_tbel_4146 88.85 88.85
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544. retro_tbel_4152 85.02 71.43
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545. retro_tbel_4156 78.78 84.32
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546. retro_tbel_4159 85.38 89.20
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547. retro_tbel_4178 74.59 62.37
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548. retro_tbel_4201 75.43 100.00
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549. retro_tbel_4218 87.33 51.92
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550. retro_tbel_4232 86.19 71.78
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551. retro_tbel_4248 76.83 55.05
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552. retro_tbel_4253 80.75 73.52
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553. retro_tbel_4264 66.08 76.31
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554. retro_tbel_4267 65.99 100.00
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555. retro_tbel_4276 76.67 50.52
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556. retro_tbel_4281 92.89 81.88
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557. retro_tbel_4291 83.33 80.49
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558. retro_tbel_4301 90.11 63.07
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559. retro_tbel_4303 68.92 51.22
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560. retro_tbel_4306 84.67 94.77
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561. retro_tbel_4321 59.20 59.93
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562. retro_tbel_4328 70.00 59.93
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563. retro_tbel_4333 80.08 88.15
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564. retro_tbel_4344 69.14 59.93
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565. retro_tbel_4349 77.27 83.62
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566. retro_tbel_4353 84.66 65.16
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567. retro_tbel_4359 84.49 63.41
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568. retro_tbel_4375 75.15 57.84
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569. retro_tbel_4394 84.11 73.87
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570. retro_tbel_4395 75.38 90.59
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571. retro_tbel_4396 82.87 74.91
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572. retro_tbel_4397 88.42 65.51
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573. retro_tbel_4445 78.75 99.30
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574. retro_tbel_4446 84.56 89.20
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575. retro_tbel_4455 79.82 76.66
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576. retro_tbel_4468 72.15 54.70
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577. retro_tbel_4476 83.90 70.38
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578. retro_tbel_4483 87.50 82.93
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579. retro_tbel_4508 77.18 50.87
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580. retro_tbel_4517 70.53 64.81
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581. retro_tbel_4544 80.83 91.99
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582. retro_tbel_4559 78.06 52.96
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583. retro_tbel_4576 87.56 75.26
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584. retro_tbel_4580 85.44 54.36
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585. retro_tbel_4582 88.79 77.00
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586. retro_tbel_4591 84.69 67.60
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587. retro_tbel_4594 62.03 53.31
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588. retro_tbel_4598 81.51 100.00
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589. retro_tbel_4603 81.85 89.90
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590. retro_tbel_4618 80.00 50.17
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591. retro_tbel_4619 77.18 51.22
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592. retro_tbel_4633 78.54 77.70
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593. retro_tbel_4637 74.59 63.41
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594. retro_tbel_4640 67.38 97.56
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595. retro_tbel_4662 90.28 100.00
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596. retro_tbel_4691 85.86 100.00
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597. retro_tbel_4694 75.90 95.82
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598. retro_tbel_4701 60.00 59.23
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599. retro_tbel_4702 86.79 54.70
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600. retro_tbel_4704 79.51 98.61
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601. retro_tbel_4709 82.35 94.08
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602. retro_tbel_4717 77.71 54.36
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603. retro_tbel_4721 89.21 82.93
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604. retro_tbel_4722 83.33 55.40
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605. retro_tbel_4731 79.60 87.11
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Download FASTA sequences of all ENSTBEG00000008626 retrocopies