Parental gene:

FOXR1, ENSSSCG00000015101

Aliases:None
Description:forkhead box R1 [Source:HGNC Symbol;Acc:29980]
Organism:Pig (Sus scrofa)
Coordinates:9:51244075..51255103(+)


>ENSSSCG00000015101
GTGGACCTGAAACTCCAGCACCTCGACTTCTGGGCCAGCCTCCATGGCCAGGTCCCAGGATTGTTGGACTGGGACATGGG
GAACGAGTCCTTTCTGGCCTTCACCACGACTCACCTGCCCTTAGCGGAACAGAACCTTGCCAGATATAAACTCCGAATAG
TTGAGCCACCAAAATTGCCTCTGGGGAAAAAACCCAACCCTGATAATGATGGTCCAGATTTTGAGCCCAACCTGTGGATG
TGGGTAGACCCCAACATCGTGTTACCTCCTGGAAAGCTGGAGGTCCCACAACCCAGTAAGGGGGAGAATCTGACAAGCAC
AGTCCCCTCCCCTCAGCTGTCCCCCAAAGAAGAAGACTTTGCCCGCTATGCAGAGGCCACAGTGGTGGAGTCACCATCAC
CGTCCAGAGAGCAGTCTCCCCCTCGGAAGCGGTTTGCCTCTTCCCCCAGCACCTGGGAGCTCACAGAAGAGGAGGAGGCT
GAGAACCAGGATGACAGCTCCTCTGTGGCTCTCCCGTCCCCTCACAAAAGGGCCCCCCTCCAGAGTCGGAGGCTTCGGCA
AACCAACAGCCAGGCGGGGAGGCTCTGGTCCCGGCCCCCTCTCAATTACTTCCATCTAATTGCACTGGCATTAAGAAACA
GTTCCCCCTGTGGCCTCAACGTGCAACAGATCTACAGTTTCACTCGACAACATTTCCCCTTTTTCCGGACGGCTCCTGAA
GGCTGGAAGAACACCGTGCGTCACAATCTCTGTTTCCGGGACTGCTTTGAGAAGGTGCCGGTCAGCATGCAGGGTGGGGC
CCCCACACGGCCTCGATCCTGCCTCTGGAAGTTGACCGAGGAGGGACACCGCCGCTTTGTGGAGGAGGTCCGGGCCTTGG
CCTCCACTCGGCTGGAAAGCATCCAGCAGTGCATGAGCCAGCCAGATGTGATGCCCTTTCTCTTTGACCTTTAA

Library Parental gene expression (RPM)
SRP014902_placenta 0 .00 RPM
SRP014902_testis 1 .98 RPM
SRP018288_heart 0 .00 RPM
SRP018288_kidney 0 .00 RPM
SRP018288_liver 0 .00 RPM
SRP018288_lung 0 .00 RPM
SRP018856_adipose 0 .03 RPM
SRP035408_brain 0 .00 RPM
SRP035408_liver 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000053 ortholog_one2one 1 retrogene
retro_amel_39,
Bos taurus ENSBTAG00000014606 ortholog_one2one 1 retrogene
retro_btau_189,
Canis familiaris ENSCAFG00000012417 ortholog_one2one 1 retrogene
retro_cfam_209,
Callithrix jacchus ENSCJAG00000013656 ortholog_one2one 1 retrogene
retro_cjac_4066,
Dasypus novemcinctus ENSDNOG00000009414 ortholog_one2one 1 retrogene
retro_dnov_22,
Dipodomys ordii ENSDORG00000001960 ortholog_one2one 1 retrogene
retro_dord_651,
Homo sapiens ENSG00000176302 ortholog_one2one 1 retrogene
retro_hsap_72,
Microcebus murinus ENSMICG00000002680 ortholog_one2one 1 retrogene
retro_mmur_38,
Macaca mulatta ENSMMUG00000022722 ortholog_one2one 1 retrogene
retro_mmul_125,
Mustela putorius furo ENSMPUG00000004890 ortholog_one2one 1 retrogene
retro_mputfur_161,
Nomascus leucogenys ENSNLEG00000007376 ortholog_one2one 1 retrogene
retro_nleu_50,
Otolemur garnettii ENSOGAG00000007258 ortholog_one2one 1 retrogene
retro_ogar_296,
Procavia capensis ENSPCAG00000010132 ortholog_one2one 1 retrogene
retro_pcap_12,
Pongo abelii ENSPPYG00000003947 ortholog_one2one 1 retrogene
retro_pabe_69,
Pan troglodytes ENSPTRG00000004358 ortholog_one2one 1 retrogene
retro_ptro_94,
Sorex araneus ENSSARG00000011319 ortholog_one2one 1 retrogene
retro_sara_38,
Ictidomys tridecemlineatus ENSSTOG00000014321 ortholog_one2one 1 retrogene
retro_itri_158,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_36 67.30 100.00
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Download FASTA sequences of all ENSSSCG00000015101 retrocopies