Parental gene:

FOXR1, ENSCJAG00000013656

Aliases:None
Description:forkhead box R1 [Source:HGNC Symbol;Acc:29980]
Organism:Marmoset (Callithrix jacchus)
Coordinates:11:16612999..16625285(+)


>ENSCJAG00000013656
GTGGACGTGAAGCTCCAGCACCTCGACTTCTGGGCCAGCCTCCATGGCCAGGTTCCGGGACTGCTGGACTGGGACATGGG
GAATGAGCTCTTTCTGGCCTTCACCACATCTCACCTCCCCTTAGCTGAGCAGAAACTTGCCAGGTATAAACTCCGAATTG
TTAAGCCACCAAAATTACCCCTAGAGAAAAAAACCAACCCTGATAAGGATGGTCCAGATTATGAGCCCAACCTGTGGATG
TGGGTAAACCCTAATATCGTGTATCCCCCTGGAAAGCTGGAGGTCCCAGGACTTATGAAGAAGGAGGATCTGACAAGCAC
GCTCCCCTCCTCTCAGCCATTCCAGAAGGAGGAAGATGCCAGCTGCTCAGAGCCCACAGGGGCGGAATCGCTGTCCCGGT
CCTCCAGCGAGTGGTCGCCCCCTCAGAAGCGGTTTGCCTTTTCCCCCAGCATCTGGGAGCTCACAGAAGAGGAGGAGGCT
GAGGACCAGGAAGACAGCTCCTCTGTGGCTCTCCCATCCCCTCACAAAAAGGCCCCCCTCCAGAGTCGGAGGCTTCGGCA
AGCCAGCAGCCAGGCGGGGAGGCTCTGGTCCCGGCCCCCTCTCAATTACTTCCACCTAATTGCCCTGGCATTAAGAAACA
GTTCCCCCTGTGGCCTCAACGTGCAACAGATCTACAGTTTCACCCGAAAGCACTTCCCCTTTTTCCGGACAGCCCCAGAA
GGCTGGAAGAATACCGTCCGTCACAATCTCTGTTTCCGAGACAGCTTTGAGAAAGTGCCTGTCAGCAGCGTGCAGGGTGG
GGCCAGCGCACGGCCTCGATCTTGCCTATGGAAGTTGACTGAGGAGGGACACCGCCGCTTTGAGGAGGAGGCCCGAGCCT
TAGCTTCCACTCGGCTGGAAAGTATCCAACGGTGCATGAGCCAGCCAGATGTGATGCCCTTTCTCTTTGACCTCTAA

Library Parental gene expression (RPM)
SRP051959_colon 0 .11 RPM
SRP051959_heart 0 .14 RPM
SRP051959_kidney 0 .07 RPM
SRP051959_liver 0 .17 RPM
SRP051959_lung 0 .28 RPM
SRP051959_lymph_node 0 .39 RPM
SRP051959_skeletal_muscle 0 .02 RPM
SRP051959_spleen 0 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000053 ortholog_one2one 1 retrogene
retro_amel_39,
Bos taurus ENSBTAG00000014606 ortholog_one2one 1 retrogene
retro_btau_189,
Canis familiaris ENSCAFG00000012417 ortholog_one2one 1 retrogene
retro_cfam_209,
Dasypus novemcinctus ENSDNOG00000009414 ortholog_one2one 1 retrogene
retro_dnov_22,
Dipodomys ordii ENSDORG00000001960 ortholog_one2one 1 retrogene
retro_dord_651,
Homo sapiens ENSG00000176302 ortholog_one2one 1 retrogene
retro_hsap_72,
Microcebus murinus ENSMICG00000002680 ortholog_one2one 1 retrogene
retro_mmur_38,
Macaca mulatta ENSMMUG00000022722 ortholog_one2one 1 retrogene
retro_mmul_125,
Mustela putorius furo ENSMPUG00000004890 ortholog_one2one 1 retrogene
retro_mputfur_161,
Nomascus leucogenys ENSNLEG00000007376 ortholog_one2one 1 retrogene
retro_nleu_50,
Otolemur garnettii ENSOGAG00000007258 ortholog_one2one 1 retrogene
retro_ogar_296,
Procavia capensis ENSPCAG00000010132 ortholog_one2one 1 retrogene
retro_pcap_12,
Pongo abelii ENSPPYG00000003947 ortholog_one2one 1 retrogene
retro_pabe_69,
Pan troglodytes ENSPTRG00000004358 ortholog_one2one 1 retrogene
retro_ptro_94,
Sorex araneus ENSSARG00000011319 ortholog_one2one 1 retrogene
retro_sara_38,
Sus scrofa ENSSSCG00000015101 ortholog_one2one 1 retrogene
retro_sscr_36,
Ictidomys tridecemlineatus ENSSTOG00000014321 ortholog_one2one 1 retrogene
retro_itri_158,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_4066 53.77 100.00
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Download FASTA sequences of all ENSCJAG00000013656 retrocopies