Parental gene:

AKIRIN2, ENSSSCG00000004307

Aliases:None
Description:akirin 2 [Source:HGNC Symbol;Acc:21407]
Organism:Pig (Sus scrofa)
Coordinates:1:62788623..62813184(-)


>ENSSSCG00000004307
ATGGCGTGCGGAGCTACTCTGAAAAGGACTCTGGATTTCGACCCGCTGCTGAGCCCAGCGTCCCCAAAGCGGAGGCGATG
TGCGCCATTGTCGGCGCCCACCTCGGCTGCCGCCTCCCCGTCGTCGGCGGCCGCGGCCACAGCCGCCTCCTTTTCGGCCG
CCGCCGCCTCGCCGCAGAAGTATCTCCGAATGGAGCCGTCTCCCTTCGGCGACGTCTCCTCCCGCCTCACCACAGAACAA
ATTCTGTACAACATAAAACAAGAGTATAAGCGCATGCAGAAGAGAAGACATTTAGAAACTAGTTTCCAACAGACAGATCC
ATGCTGTACTTCTGATGCACAGCCACATGCATTTCTCCTCAGTGGACCAGCTTCACCAGGGACTCCATCAGCAACGTCCT
CACCATTAAAAAAAGAACAGCCCTTATTCACCCTACGGCAGGTTGGGATGATCTGTGAACGTTTATTGAAAGAACGTGAA
GAGAAAGTTCGAGAAGAGTATGAAGAAATACTGAACACAAAACTTGCAGAACAATATGATGCATTTGTGAAGTTTACGCA
TGATCAAATAATGCGACGATATGGAGAACAGCCTGCTAGTTATGTTTCATGA

Library Parental gene expression (RPM)
SRP014902_placenta 73 .80 RPM
SRP014902_testis 53 .18 RPM
SRP018288_heart 24 .70 RPM
SRP018288_kidney 47 .28 RPM
SRP018288_liver 36 .62 RPM
SRP018288_lung 70 .16 RPM
SRP018856_adipose 42 .73 RPM
SRP035408_brain 81 .15 RPM
SRP035408_liver 32 .85 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003082 ortholog_one2one 1 retrogene
retro_cfam_1014,
Choloepus hoffmanni ENSCHOG00000012160 ortholog_one2one 1 retrogene
retro_chof_413,
Callithrix jacchus ENSCJAG00000000769 ortholog_one2one 1 retrogene
retro_cjac_2231,
Dasypus novemcinctus ENSDNOG00000000549 ortholog_one2one 1 retrogene
retro_dnov_1788,
Homo sapiens ENSG00000135334 ortholog_one2one 1 retrogene
retro_hsap_2991,
Gorilla gorilla ENSGGOG00000002448 ortholog_one2one 1 retrogene
retro_ggor_2071,
Macaca mulatta ENSMMUG00000002824 ortholog_one2one 1 retrogene
retro_mmul_1914,
Pongo abelii ENSPPYG00000016831 ortholog_one2one 1 retrogene
retro_pabe_2477,
Pan troglodytes ENSPTRG00000018409 ortholog_one2one 1 retrogene
retro_ptro_2023,
Rattus norvegicus ENSRNOG00000008288 ortholog_one2one 1 retrogene
retro_rnor_1499,
Sorex araneus ENSSARG00000006084 ortholog_one2one 1 retrogene
retro_sara_701,
Sarcophilus harrisii ENSSHAG00000011555 ortholog_one2one 2 retrogenes
retro_shar_363, retro_shar_579,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_897 85.60 61.58
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Download FASTA sequences of all ENSSSCG00000004307 retrocopies