Parental gene:

AKIRIN2, ENSCAFG00000003082

Aliases:None
Description:akirin 2 [Source:HGNC Symbol;Acc:21407]
Organism:Dog (Canis familiaris)
Coordinates:12:47114199..47133227(-)


>ENSCAFG00000003082
ATGGCGTGCGGCGCCACTCTGAAAAGGACTCTGGATTTCGACCCGCTGCTGAGCCCAGCGTCCCCGAAGCGGAGGCGATG
TGCGCCATTGTCGGCGCCCACCTCGGCTGCTGCCTCTCCGTCGGCGGCGGCCGCCGCCACCGCCGCCTCCTTCTCGGCCG
CCGCCGCCTCGCCGCAGAAGTATCTCCGAATGGAGCCGTCCCCCTTTGGCGACGTCTCCTCCCGCCTCACCACAGAACAA
ATTCTGTACAACATAAAACAAGAGTATAAACGCATGCAGAAGAGAAGACATTTAGAAACTAGTTTCCAACAGACAGATCC
ATGTTGTACTTCTGAGGCACAACCACATGCATTTCTCCTCAGTGGACCAGCTTCACCAGGGACTTCATCTGCAACATCCT
CACCATTAAAAAAAGAACAGCCCTTATTTACTCTACGACAGGTTGGGATGATCTGTGAACGTTTGTTGAAAGAACGTGAA
GAGAAAGTTCGAGAAGAGTATGAAGAAATATTGAACACAAAACTTGCAGAACAATATGATGCATTTGTGAAGTTTACGCA
TGATCAAATAATGCGACGATACGGAGAACAGCCTGCTAGTTATGTTTCATGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 23 .35 RPM
SRP017611_brain 18 .10 RPM
SRP017611_kidney 7 .59 RPM
SRP017611_liver 4 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003186 within_species_paralog 4 retrogenes
retro_cfam_1099, retro_cfam_1915, retro_cfam_2086, retro_cfam_810,
Choloepus hoffmanni ENSCHOG00000012160 ortholog_one2one 1 retrogene
retro_chof_413,
Callithrix jacchus ENSCJAG00000000769 ortholog_one2one 1 retrogene
retro_cjac_2231,
Dasypus novemcinctus ENSDNOG00000000549 ortholog_one2one 1 retrogene
retro_dnov_1788,
Homo sapiens ENSG00000135334 ortholog_one2one 1 retrogene
retro_hsap_2991,
Gorilla gorilla ENSGGOG00000002448 ortholog_one2one 1 retrogene
retro_ggor_2071,
Macaca mulatta ENSMMUG00000002824 ortholog_one2one 1 retrogene
retro_mmul_1914,
Pongo abelii ENSPPYG00000016831 ortholog_one2one 1 retrogene
retro_pabe_2477,
Pan troglodytes ENSPTRG00000018409 ortholog_one2one 1 retrogene
retro_ptro_2023,
Rattus norvegicus ENSRNOG00000008288 ortholog_one2one 1 retrogene
retro_rnor_1499,
Sorex araneus ENSSARG00000006084 ortholog_one2one 1 retrogene
retro_sara_701,
Sarcophilus harrisii ENSSHAG00000011555 ortholog_one2one 2 retrogenes
retro_shar_363, retro_shar_579,
Sus scrofa ENSSSCG00000004307 ortholog_one2one 1 retrogene
retro_sscr_897,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1014 91.73 65.52
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Download FASTA sequences of all ENSCAFG00000003082 retrocopies