Parental gene:

ENSSSCG00000000408

Aliases:None
Description:None
Organism:Pig (Sus scrofa)
Coordinates:5:23735544..23749965(-)


>ENSSSCG00000000408
ATGCATGATGAACTTCAACAAAGCTTCCAAAAGCATCAGAATTCACTTCAGCGTTGGGAGTATTTGAAGAAAGCAGCCAG
CAGATATCAGAATAACAGCAAAAATGATAAATGTGGACCCTGGCTTGAGTGGGAAATTATGCTCCAATACTGTTTTCCAC
GACTGGATATCAATGTTAGCAAAGGAATCAATCATTTACTGAAGAGCCCGTTTAGTGTTCATCCTAAAACAGGTCGCATT
TCTGTGCCTATTGATTTACAGAAAGTGGATCAGTTTGACCCATTTACTGTTCCAACCATAAGTTCCATCTGCCATGAATT
GGATGCTATTTCTACTAATGAAGAAGAAAAAGAAAATGGAGCTGAATCTGGTATCAAACATAGAACCAGAGACTATAAGA
AAACCAGTCTAGCTCCTTTCGTAAAAGTTTTTGAACAGTTTCTTGAAAACCTGGATAGATCCCGGAAAGGAGAACTTCTC
AAGAAGAGTGATTTACAAAAAGACTTCTGA

Library Parental gene expression (RPM)
SRP014902_placenta 0 .00 RPM
SRP014902_testis 0 .14 RPM
SRP018288_heart 0 .65 RPM
SRP018288_kidney 0 .79 RPM
SRP018288_liver 1 .12 RPM
SRP018288_lung 1 .22 RPM
SRP018856_adipose 0 .00 RPM
SRP035408_brain 1 .68 RPM
SRP035408_liver 1 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Equus caballus ENSECAG00000015297 ortholog_many2many 1 retrogene
retro_ecab_447,
Homo sapiens ENSG00000198056 ortholog_one2many 1 retrogene
retro_hsap_339,
Mustela putorius furo ENSMPUG00000001603 ortholog_one2many 1 retrogene
retro_mputfur_587,
Nomascus leucogenys ENSNLEG00000017443 ortholog_one2many 1 retrogene
retro_nleu_1780,
Oryctolagus cuniculus ENSOCUG00000003458 ortholog_one2many 1 retrogene
retro_ocun_1265,
Procavia capensis ENSPCAG00000007103 ortholog_one2many 1 retrogene
retro_pcap_174,
Pongo abelii ENSPPYG00000004672 ortholog_one2many 1 retrogene
retro_pabe_356,
Pan troglodytes ENSPTRG00000022987 ortholog_one2many 1 retrogene
retro_ptro_271,
Pteropus vampyrus ENSPVAG00000008017 ortholog_one2many 2 retrogenes
retro_pvam_153, retro_pvam_703,
Tupaia belangeri ENSTBEG00000012998 ortholog_one2many 1 retrogene
retro_tbel_2255,
Tursiops truncatus ENSTTRG00000002153 ortholog_one2many 1 retrogene
retro_ttru_352,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_499 60.44 52.66
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Download FASTA sequences of all ENSSSCG00000000408 retrocopies