Parental gene:

PRIM1, ENSPVAG00000008017

Aliases:None
Description:primase, DNA, polypeptide 1 (49kDa) [Source:HGNC Symbol;Acc:9369]
Organism:Megabat (Pteropus vampyrus)
Coordinates:scaffold_12223:20294..36961(-)


>ENSPVAG00000008017
ATGGAGGCGTTTGACCCCGCGGAGCTGCCGGAGCTGCTTAAGCTTTATTACCGAAGGCTCTTTCCCTACGCCCAGTACTA
TCGCTGGCTTAACTATGGCGGAGTGATAAAGAATTACTTTCAACACCGTGAATTTTCATTCACATTGAAAGATGATATTT
ACATTCGCTACCAATCCTTCAACAACCAGAGTGATCTGGAAAAGGAGATGCAGAAAATGAATCCATACAAGATTGATATA
GGCGCGGTATATTCTCACAGACCCAATCAACATAATACAGTGAAGCTGGGAGCTTTTCAGGCTCAGGAAAAAGAACTGGT
GTTTGACATTGACATGACAGACTATGATGATGTGAGGAGATGTTGTAGTTCTGCAGACATATGTTCTAAGTGCTGGACCC
TGATGACGATGGCCATACGTATCATCGACCGAGCATTGAAGGAGGACTTTGGATTTAAGCATCGCCTCTGGGTATATTCT
GGAAGAAGAGGTGTTCATTGTTGGGTCTGTGATGAATCAGTTAGAAAACTGTCCTCTGCTGTACGTTCTGGGATAGTTGA
GTATTTGAGTCTTGTAAAGGGTGGTCCAGATGTTAAAAAGAAAGTTCACCTAAGTGAAAAAATTCACCCTTTTGTCAGAA
AATCTATAAACATAATAAATAAATACTTTGAAGAATACGCGTTAGTTGATCAAGATATCTTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATTCATGATGAACTTCAACAAAGCTTCCAAAATCATCACAGTTCACTTCA
GCGTTGGGAGCATTTGAAGAAAGTAGCCAGATGTCTGAGTAACATCAAAAGTGATAAATATGGACCCTGGCTTGAGTGGG
AGATCATGCTCCAGTACTGTTTTCCACGGCTGGATATTAATGTTAGCAAAGGAATCAATCACTTGTTGAAGAGCCCTTTT
AGTGTTCATCCTAAAACAGGTCGAATTTCTGTGCCTATCGATTTACAGAAAGTGGATCAGTTTGATCCATTTACTGTTCC
AACCATAAGCTCCATCTGCCATGAATTAGATGCCATTTCCACAATTGAAGAGGAGAAAGGGGAGAACAAAGCTGAGTCTA
TTATCAAACATAGAACCAGAGATTATAAGAAGACCAGTCTAGCTCCTTATGTAAAAGTTTTTGAACAGTTTCTTGAAAAT
CTGGATAAATCCCGAAAAGGAGAACTTCTCAGGAAGAGTGTTTCAATGAGATGTTTT

Species Parental gene accession Homology type Retrogenes number
Equus caballus ENSECAG00000015297 ortholog_one2many 1 retrogene
retro_ecab_447,
Homo sapiens ENSG00000198056 ortholog_one2one 1 retrogene
retro_hsap_339,
Mustela putorius furo ENSMPUG00000001603 ortholog_one2one 1 retrogene
retro_mputfur_587,
Nomascus leucogenys ENSNLEG00000017443 ortholog_one2one 1 retrogene
retro_nleu_1780,
Oryctolagus cuniculus ENSOCUG00000003458 ortholog_one2one 1 retrogene
retro_ocun_1265,
Procavia capensis ENSPCAG00000007103 ortholog_one2one 1 retrogene
retro_pcap_174,
Pongo abelii ENSPPYG00000004672 ortholog_one2one 1 retrogene
retro_pabe_356,
Pan troglodytes ENSPTRG00000022987 ortholog_one2one 1 retrogene
retro_ptro_271,
Sus scrofa ENSSSCG00000000408 ortholog_one2many 1 retrogene
retro_sscr_499,
Tupaia belangeri ENSTBEG00000012998 ortholog_one2one 1 retrogene
retro_tbel_2255,
Tursiops truncatus ENSTTRG00000002153 ortholog_one2one 1 retrogene
retro_ttru_352,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_153 62.90 57.52
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2. retro_pvam_703 72.52 93.79
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Download FASTA sequences of all ENSPVAG00000008017 retrocopies