Parental gene:

PRIM1, ENSPPYG00000004672

Aliases:None
Description:primase, DNA, polypeptide 1 (49kDa) [Source:HGNC Symbol;Acc:9369]
Organism:Orangutan (Pongo abelii)
Coordinates:12:56520253..56542486(-)


>ENSPPYG00000004672
ATGGAGACGTTTGACCCTACCGAGCTGCCCGAGCTGCTTAAACTTTATTACCGGAGGCTCTTTCCCTACTCTCAGTACTA
TCGCTGGCTCAACTACGGCGGAGTGATAAAGAATTACTTTCAACACCGTGAATTTTCATTCACATTGAAAGATGATATTT
ACATTCGCTACCAATCCTTCAACAACCAGAGTGATCTGGAAAAGGAGATGCAGAAAATGAATCCGTACAAGATTGATATA
GGCGCAGTATATTCCCACAGACCCAATCAACACAATACAGTGAAGCTGGGAGCTTTCCAGGCTCAGGAAAAAGAACTGGT
ATTTGACATTGACATGACAGACTATGACGATGTGAGGAGATGTTGTAGTTCTGCAGACATATGTCCTAAGTGCTGGACCC
TCATGACAATGGCCATACGCATCATTGACAGAGCATTGAAGGAGGACTTTGGATTTAAGCATCGTCTCTGGGTATATTCT
GGAAGGAGAGGTGTTCATTGTTGGGTCTGTGATGAATCAGTTAGAAAATTGTCTTCTGCAGTACGTTCTGGGATAGTTGA
ATATTTGAGCCTTGTAAAGGGTGGTCAAGACGTTAAAAAGAAAGTTCACCTAAGTGAAAAAATTCACCCTTTTATCAGAA
AATCTATAAACATAATAAAAAAATACTTTGAAGAATATGCCTTGGTTAATCAAGATATTCTCGAAAATAAAGAAAGCTGG
GATAAGATTTTAGCCCTTGTTCCTGAAACAATTCATGATGAACTTCAACAAAGCTTCCAAAAGTCTCACAATTCACTTCA
GCGTTGGGAGCACTTGAAGAAAGTAGCCAGCAAATGTCAGAATAACATCAAAAATGACAAATATGGACCCTGGCTGGAGT
GGGAGATTATGCTCCAGTACTGTTTTCCACGGCTGGATATCAATGTCAGCAAAGGAATCAATCATCTACTGAAGAGCCCT
TTTAGTGTTCATCCTAAAACAGGTCGCATATCTGTGCCTATTGATTTGCAGAAAGTGGACCAGTTTGATCCATTTACTGT
TCCGACCATAAGCTTCATCTGCCGTGAATTGGATGCCATTTCCACTAATGAAGAGGAAAAAGAGGAGAATGAAGCTGAAT
CTGATGTCAAACATAGAACCAGAGATTACAAGAAGACCAGTCTAGCACCTTATGTGAAAGTTTTTGAACATTTTCTTGAA
AACCTGGATAAATCCCAAAAAGGAGAACTTCTTAAGAAGAGTGATTTACAAAAAGATTTCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 3 .26 RPM
SRP007412_cerebellum 10 .34 RPM
SRP007412_heart 1 .29 RPM
SRP007412_kidney 2 .75 RPM
SRP007412_liver 2 .85 RPM



Species Parental gene accession Homology type Retrogenes number
Equus caballus ENSECAG00000015297 ortholog_one2many 1 retrogene
retro_ecab_447,
Homo sapiens ENSG00000198056 ortholog_one2one 1 retrogene
retro_hsap_339,
Mustela putorius furo ENSMPUG00000001603 ortholog_one2one 1 retrogene
retro_mputfur_587,
Nomascus leucogenys ENSNLEG00000017443 ortholog_one2one 1 retrogene
retro_nleu_1780,
Oryctolagus cuniculus ENSOCUG00000003458 ortholog_one2one 1 retrogene
retro_ocun_1265,
Procavia capensis ENSPCAG00000007103 ortholog_one2one 1 retrogene
retro_pcap_174,
Pan troglodytes ENSPTRG00000022987 ortholog_one2one 1 retrogene
retro_ptro_271,
Pteropus vampyrus ENSPVAG00000008017 ortholog_one2one 2 retrogenes
retro_pvam_153, retro_pvam_703,
Sus scrofa ENSSSCG00000000408 ortholog_one2many 1 retrogene
retro_sscr_499,
Tupaia belangeri ENSTBEG00000012998 ortholog_one2one 1 retrogene
retro_tbel_2255,
Tursiops truncatus ENSTTRG00000002153 ortholog_one2one 1 retrogene
retro_ttru_352,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_356 84.44 63.81
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Download FASTA sequences of all ENSPPYG00000004672 retrocopies