Parental gene:

ENSECAG00000015297

Aliases:None
Description:None
Organism:Horse (Equus caballus)
Coordinates:6:74278352..74295988(-)


>ENSECAG00000015297
GTGGTAAAGAATTACTTTCAACACCGTGAATTTTCCTTCACATTGAAAGATGATATTTACATTCGCTACCAATCCTTCAA
CAACCAGAGTGATCTGGAAAAGGAGATGCAGAAAATGAATCCTTACAAGATTGACATAGGCGCGGTGTATTCCCACAGAC
CCAATCAACACAATACAGTGAAGCTGGGAGCTTTCCAGGCCCAGGAAAAAGAACTGGTGTTTGACATTGACATGACAGAC
TACGACGATGTGAGGAGATGTTGTAGTTCTGCAGACATATGTTCTAAGTGCTGGACCTTGATGACCATGGCCATACGCAT
CATCGACCGAGCATTAAAGGGCAAGGACTTTGGATTTAAGCATCGTCTCTGGGTATATTCTGGAAGGAGAGGTGTTCATT
GTTGGGTCTGTGATGAATCAGTTAGAAAATTGTCCTCCGCAGTACGTTCTGGGATAGTTGAGTATTTGAGTCTTGTAAAG
GGTGGTCAAGATGTTAAAAAGAAAGTTCACCTAAGTGAAAATGTCCACCCTTTTGTCAGAAAATCTATAAGCATAATAAA
AAAATACTTTGAAGGATATGCCTTGGTGGGTCAAGATATTCTTGAAAATAAAGAAAGCTGGGATAAGATTTTAGCCCTTG
TCTACCCATCACCAATGCATAATGACCTTCAACAGAACTTCCAAAAGCATCACAGTTCACTTCAGCGTTGGGAGTATTTG
AAGAAGGCAGCCAGCCAATGTCCGAGTAACATCAAAAATGAGAAATGTGGACCCTGGCTTGAGTGGGAGATTATGCTCCA
GTACTGTTTTCCACGGCTGGATATCAACGTTAGCAAAGGAATCAATCATTTACTGAAGAGCCCTTTCAGTGTTCATCCGA
AAACAGGTCGCATTTCTGTGCCTATTGATTTACAGAAAGTGGATCAGTTTGATCCATTTGCTGTTCCAACCATAAGCTCT
ATCTGCCATGAATTGGATGCCATTTTCACTAGTGAAGCGGAAAAAGAGGAGAACCAAGCTGAATCTGACATCAAACATAG
AACCAGAGATTATAAGAAGACCAGCCTAGCTCCTTATGTAAAAGTTTTTGAACAGTTTCTTGAAAACCTGGATAAATCCC
GAAAAGGAGAACTTCTCAAGAAGAGTGATTTACAAAAAGACTTCTGA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 0 .06 RPM
SRP021940_cerebellum 0 .10 RPM
SRP021940_embryo 16 .62 RPM
SRP021940_placental_villous 2 .79 RPM
SRP021940_synovial_membrane 4 .31 RPM
SRP021940_testis 16 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000198056 ortholog_one2many 1 retrogene
retro_hsap_339,
Mustela putorius furo ENSMPUG00000001603 ortholog_one2many 1 retrogene
retro_mputfur_587,
Nomascus leucogenys ENSNLEG00000017443 ortholog_one2many 1 retrogene
retro_nleu_1780,
Oryctolagus cuniculus ENSOCUG00000003458 ortholog_one2many 1 retrogene
retro_ocun_1265,
Procavia capensis ENSPCAG00000007103 ortholog_one2many 1 retrogene
retro_pcap_174,
Pongo abelii ENSPPYG00000004672 ortholog_one2many 1 retrogene
retro_pabe_356,
Pan troglodytes ENSPTRG00000022987 ortholog_one2many 1 retrogene
retro_ptro_271,
Pteropus vampyrus ENSPVAG00000008017 ortholog_one2many 2 retrogenes
retro_pvam_153, retro_pvam_703,
Sus scrofa ENSSSCG00000000408 ortholog_many2many 1 retrogene
retro_sscr_499,
Tupaia belangeri ENSTBEG00000012998 ortholog_one2many 1 retrogene
retro_tbel_2255,
Tursiops truncatus ENSTTRG00000002153 ortholog_one2many 1 retrogene
retro_ttru_352,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_447 70.81 100.00
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Download FASTA sequences of all ENSECAG00000015297 retrocopies